Functional clusters

Information

  • Type InterPro
  • Description Chalcone/stilbene synthase, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 5 CH_aag_116 3 4 0.000000772869
Acer truncatum chr4 5 CH_acertr_454 3 6 0.0000125171
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_10 20 29 3.04564e-49
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 5 CH_arhy_3 29 50 1.48538e-70
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_927 3 3 0.0000871543
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 5 CH_arhy_928 3 3 0.0000871543
Brassica napus C02 5 CH_bna_713 3 4 0.00000418342
Beta vulgaris Chr1_EL10_PGA_scaffold3 5 CH_bvu_125 4 5 0.00000000421287
Camellia sinensis var. sinensis Contig790 5 CH_camsi_1538 2 2 0.000962949
Cannabis sativa NC_044379.1 5 CH_cansat_280 3 4 0.00000217282
Capsicum annuum PGAv.1.6.scaffold706 5 CH_can_377 3 3 0.00000168913
Cicer arietinum L. Ca_LG8_v3 5 CH_car_88 3 3 0.000000318032
Citrus clementina scaffold_8 5 CH_ccl_291 4 7 0.0000000790291
Ceratophyllum demersum 11 5 CH_cde_145 3 4 0.00000449027
Carpinus fangiana Cfa06 5 CH_cfa_98 5 8 0.00000000000174053
Corchorus olitorius AWUE01016403.1 5 CH_col_74 3 3 0.00000128001
Capsella rubella scaffold_3 5 CH_cru_641 2 2 0.000731154
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_163 4 6 0.0000000013414
Eucalyptus grandis Chr05 5 CH_egr_304 6 11 0.0000000000000122411
Fragaria vesca Fvb2 5 CH_fve_779 2 2 0.000589102
Gossypium hirsutum A05 5 CH_ghi_1095 3 12 0.000361674
Gossypium hirsutum D05 5 CH_ghi_1240 3 15 0.000747552
Glycine max Gm08 5 CH_gma_15 12 20 4.48505e-33
Gossypium raimondii Chr09 5 CH_gra_474 3 13 0.000147715
Helianthus annuus HanXRQChr11 5 CH_han_181 5 6 0.00000000000116665
Lupinus albus Lalb_Chr09 5 CH_lal_234 3 3 0.000000495806
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_66 7 14 1.64414e-18
Magnolia biondii Chr11 5 CH_mbi_269 4 7 0.00000000252497
Malus domestica Chr15 5 CH_mdo_166 5 7 0.00000000000278959
Manihot esculenta Chromosome11 5 CH_mes_217 4 5 0.00000000112692
Medicago truncatula chr5 5 CH_mtr_105 7 8 1.45674e-18
Medicago truncatula chr7 5 CH_mtr_288 5 7 0.0000000000238313
Medicago truncatula chr1 5 CH_mtr_795 3 3 0.00000582402
Populus trichocarpa Chr03 5 CH_ptr_394 3 3 0.00000143327
Phaseolus vulgaris Chr02 5 CH_pvu_26 9 9 2.92929e-26
Quercus lobata 9 5 CH_qlo_1748 3 27 0.000653016
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_579 3 3 0.000000133499
Simmondsia chinensis GWHAASQ00000007 5 CH_sci_191 3 3 0.00000239236
Trochodendron aralioides group17 5 CH_tar_33 7 9 1.51859e-18
Theobroma cacao Chromosome_5 5 CH_tca_347 3 3 0.000000450584
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_130 5 14 0.00000000147612
Trifolium pratense Tp57577_TGAC_v2_scaf_467 5 CH_tpr_327 3 3 0.00000391093
Vanilla planifolia CM028161.1 5 CH_vpl_38 5 5 0.000000000000287761
Vitis vinifera chr16 5 CH_vvi_3 20 22 1.37159e-58
Zea mays 3 5 CH_zma_201 4 12 0.000000471394
Zea mays 4 5 CH_zma_234 3 3 0.00000266676
Zea mays 4 5 CH_zma_363 3 7 0.000093227
Anthoceros agrestis Sc2ySwM_117 6 CH_aag_116 3 4 0.000000772869
Acer truncatum chr4 6 CH_acertr_454 3 6 0.0000125171
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_10 20 29 3.04564e-49
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 6 CH_arhy_3 29 50 1.48538e-70
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_927 3 3 0.0000871543
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 6 CH_arhy_928 3 3 0.0000871543
Brassica napus C02 6 CH_bna_713 3 4 0.00000418342
Beta vulgaris Chr1_EL10_PGA_scaffold3 6 CH_bvu_125 4 5 0.00000000421287
Camellia sinensis var. sinensis Contig790 6 CH_camsi_1538 2 2 0.000962949
Cannabis sativa NC_044379.1 6 CH_cansat_280 3 4 0.00000217282
Capsicum annuum PGAv.1.6.scaffold706 6 CH_can_377 3 3 0.00000168913
Cicer arietinum L. Ca_LG8_v3 6 CH_car_88 3 3 0.000000318032
Citrus clementina scaffold_8 6 CH_ccl_291 4 7 0.0000000790291
Ceratophyllum demersum 11 6 CH_cde_145 3 4 0.00000449027
Carpinus fangiana Cfa06 6 CH_cfa_98 5 8 0.00000000000174053
Corchorus olitorius AWUE01016403.1 6 CH_col_74 3 3 0.00000128001
Capsella rubella scaffold_3 6 CH_cru_641 2 2 0.000731154
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_163 4 6 0.0000000013414
Eucalyptus grandis Chr05 6 CH_egr_304 6 11 0.0000000000000122411
Fragaria x ananassa Fvb2-1 6 CH_fan_485 3 5 0.0000019904
Fragaria vesca Fvb2 6 CH_fve_779 2 2 0.000589102
Gossypium hirsutum A05 6 CH_ghi_1095 3 12 0.000361674
Gossypium hirsutum D05 6 CH_ghi_1240 3 15 0.000747552
Glycine max Gm08 6 CH_gma_15 12 20 4.48505e-33
Gossypium raimondii Chr09 6 CH_gra_474 3 13 0.000147715
Helianthus annuus HanXRQChr11 6 CH_han_181 5 6 0.00000000000116665
Lupinus albus Lalb_Chr09 6 CH_lal_234 3 3 0.000000495806
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_66 7 14 1.64414e-18
Magnolia biondii Chr11 6 CH_mbi_269 4 7 0.00000000252497
Malus domestica Chr15 6 CH_mdo_166 5 7 0.00000000000278959
Manihot esculenta Chromosome11 6 CH_mes_217 4 5 0.00000000112692
Medicago truncatula chr5 6 CH_mtr_105 7 8 1.45674e-18
Medicago truncatula chr7 6 CH_mtr_288 5 7 0.0000000000238313
Medicago truncatula chr1 6 CH_mtr_795 3 3 0.00000582402
Populus trichocarpa Chr03 6 CH_ptr_394 3 3 0.00000143327
Phaseolus vulgaris Chr02 6 CH_pvu_26 9 9 2.92929e-26
Quercus lobata 9 6 CH_qlo_1748 3 27 0.000653016
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_579 3 3 0.000000133499
Simmondsia chinensis GWHAASQ00000007 6 CH_sci_191 3 3 0.00000239236
Trochodendron aralioides group17 6 CH_tar_33 7 9 1.51859e-18
Theobroma cacao Chromosome_5 6 CH_tca_347 3 3 0.000000450584
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_130 5 14 0.00000000147612
Trifolium pratense Tp57577_TGAC_v2_scaf_467 6 CH_tpr_327 3 3 0.00000391093
Vanilla planifolia CM028161.1 6 CH_vpl_38 5 5 0.000000000000287761
Vitis vinifera chr16 6 CH_vvi_3 20 22 1.37159e-58
Zea mays 3 6 CH_zma_201 4 12 0.000000471394
Zea mays 4 6 CH_zma_234 3 3 0.00000266676
Zea mays 4 6 CH_zma_363 3 7 0.000093227

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001