Functional clusters

Information

  • Type InterPro
  • Description Prephenate dehydratase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 5 CH_bca_397 4 7 0.0000000108929
Brassica carinata ChrC07 5 CH_bca_793 3 3 0.00000138732
Corylus avellana 6 5 CH_cav_819 2 2 0.000766695
Chenopodium quinoa C_Quinoa_Scaffold_4082 5 CH_cqu_1058 2 2 0.000995025
Marchantia polymorpha scaffold_24 5 CH_mpo_185 2 2 0.000331327
Papaver somniferum NC_039366.1 5 CH_pso_533 3 3 0.000000426366
Rhododendron simsii chr01 5 CH_rsi_1022 2 2 0.000967961
Sequoiadendron giganteum chr4 5 CH_sgi_1923 3 13 0.0000854069
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_128 5 27 0.00000000251976
Brassica carinata ChrC07 6 CH_bca_397 4 7 0.0000000108929
Brassica carinata ChrC07 6 CH_bca_793 3 3 0.00000138732
Corylus avellana 6 6 CH_cav_819 2 2 0.000766695
Chenopodium quinoa C_Quinoa_Scaffold_4082 6 CH_cqu_1058 2 2 0.000995025
Marchantia polymorpha scaffold_24 6 CH_mpo_185 2 2 0.000331327
Papaver somniferum NC_039366.1 6 CH_pso_533 3 3 0.000000426366
Rhododendron simsii chr01 6 CH_rsi_1022 2 2 0.000967961
Sequoiadendron giganteum chr4 6 CH_sgi_1923 3 13 0.0000854069
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_128 5 27 0.00000000251976

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001