Functional clusters

Information

  • Type InterPro
  • Description O-methyltransferase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 5 CH_aar_62 6 7 0.000000000000229103
Acer truncatum chr6 5 CH_acertr_16 9 10 5.97479e-23
Acer truncatum chr6 5 CH_acertr_287 4 5 0.000000107538
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 5 CH_arhy_146 8 10 8.5004e-17
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_187 7 8 0.0000000000000103139
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_332 6 10 0.000000000181978
Brassica carinata Contig846 5 CH_bca_1616 3 4 0.000242652
Brassica carinata ChrB03 5 CH_bca_482 4 4 0.0000000512561
Brassica napus A06 5 CH_bna_939 3 3 0.0000335015
Brassica napus C06 5 CH_bna_940 3 3 0.0000335015
Brassica rapa A01 5 CH_bra_624 3 8 0.000924057
Camellia sinensis var. sinensis Chr9 5 CH_camsi_1112 3 5 0.000141632
Camellia sinensis var. sinensis Chr5 5 CH_camsi_409 6 41 0.000000014835
Camellia sinensis var. sinensis Chr5 5 CH_camsi_820 4 15 0.0000123534
Capsicum annuum PGAv.1.6.scaffold179 5 CH_can_468 4 8 0.0000192121
Capsicum annuum PGAv.1.6.scaffold616 5 CH_can_498 4 9 0.0000345323
Cicer arietinum L. Ca_LG2_v3 5 CH_car_246 3 5 0.000120716
Corylus avellana 7 5 CH_cav_360 4 6 0.0000050537
Corylus avellana 2 5 CH_cav_38 9 15 1.02424e-17
Coffea canephora chr0 5 CH_ccan_46 6 46 0.00000000000292733
Coffea canephora chr0 5 CH_ccan_630 3 18 0.000434642
Citrus clementina scaffold_3 5 CH_ccl_104 8 9 0.00000000000000454511
Citrus clementina scaffold_9 5 CH_ccl_404 4 4 0.00000386205
Citrus clementina scaffold_2 5 CH_ccl_405 4 4 0.00000386205
Citrus clementina scaffold_4 5 CH_ccl_459 5 14 0.0000259596
Citrus clementina scaffold_2 5 CH_ccl_460 5 14 0.0000259596
Ceratophyllum demersum 2 5 CH_cde_498 2 2 0.000789796
Carya illinoinensis Chr01 5 CH_cil_113 7 10 0.000000000000028602
Carya illinoinensis Chr06 5 CH_cil_147 6 7 0.00000000000134862
Carya illinoinensis Chr04 5 CH_cil_334 4 4 0.000000116589
Carya illinoinensis Chr03 5 CH_cil_76 8 9 2.59894e-18
Citrullus lanatus CG_Chr02 5 CH_cla_75 4 5 0.00000001429
Chenopodium quinoa C_Quinoa_Scaffold_3333 5 CH_cqu_691 3 3 0.0000933521
Chenopodium quinoa C_Quinoa_Scaffold_2933 5 CH_cqu_692 3 3 0.0000933521
Capsella rubella scaffold_2 5 CH_cru_384 3 4 0.0000179557
Cucumis sativus L. chr7 5 CH_csa_270 3 3 0.00000852947
Daucus carota DCARv2_Chr1 5 CH_dca_286 3 3 0.00000222097
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_31 10 61 9.10848e-19
Eucalyptus grandis Chr01 5 CH_egr_116 12 18 8.39387e-24
Eucalyptus grandis Chr08 5 CH_egr_1300 3 3 0.000438403
Eucalyptus grandis Chr08 5 CH_egr_179 9 10 5.08595e-19
Eucalyptus grandis Chr01 5 CH_egr_552 5 5 0.00000000225518
Eutrema salsugineum scaffold_2 5 CH_esa_147 6 45 0.0000000249548
Gossypium hirsutum D10 5 CH_ghi_295 5 6 0.000000000256914
Gossypium hirsutum D12 5 CH_ghi_811 3 3 0.000056034
Glycine max Gm07 5 CH_gma_570 3 3 0.000047758
Glycine max Gm20 5 CH_gma_571 3 3 0.000047758
Glycine max Gm13 5 CH_gma_982 3 6 0.000953108
Gossypium raimondii Chr11 5 CH_gra_46 9 11 2.99713e-21
Lonicera japonica GWHAAZE00000001 5 CH_lonja_108 7 7 2.81756e-19
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_654 3 6 0.000140201
Magnolia biondii Chr08 5 CH_mbi_1100 4 18 0.000471366
Magnolia biondii Chr15 5 CH_mbi_427 6 31 0.000000196117
Magnolia biondii Chr18 5 CH_mbi_569 4 6 0.00000234113
Magnolia biondii Chr18 5 CH_mbi_838 3 3 0.00011502
Malus domestica Chr10 5 CH_mdo_1147 3 4 0.00026602
Malus domestica Chr07 5 CH_mdo_1148 3 4 0.00026602
Malus domestica Chr01 5 CH_mdo_139 7 14 0.000000000000240257
Malus domestica Chr05 5 CH_mdo_316 5 8 0.00000000396986
Malus domestica Chr01 5 CH_mdo_851 5 40 0.000045385
Malus domestica Chr01 5 CH_mdo_872 3 3 0.0000665583
Malus domestica Chr17 5 CH_mdo_873 3 3 0.0000665583
Manihot esculenta Chromosome13 5 CH_mes_18 15 18 1.64182e-38
Marchantia polymorpha scaffold_44 5 CH_mpo_113 3 3 0.0000124421
Medicago truncatula chr7 5 CH_mtr_1009 3 3 0.0000823187
Nicotiana tabacum Nitab4.5_0000009 5 CH_nta_121 3 3 0.00000151713
Nicotiana tabacum Nitab4.5_0000107 5 CH_nta_163 3 6 0.0000303152
Olea europaea chr16 5 CH_oeu_173 3 3 0.000000512889
Oryza sativa ssp. japonica chr04 5 CH_osa_532 3 4 0.000082957
Petunia axillaris Peaxi162Scf00010 5 CH_pax_330 3 3 0.00000987543
Prunus persica Pp02 5 CH_ppe_102 8 12 9.76834e-17
Prunus persica Pp08 5 CH_ppe_196 6 11 0.0000000000659604
Prunus persica Pp03 5 CH_ppe_241 6 16 0.00000000113726
Populus trichocarpa Chr19 5 CH_ptr_511 3 3 0.0000357816
Phaseolus vulgaris Chr09 5 CH_pvu_34 10 11 1.69503e-24
Phaseolus vulgaris Chr11 5 CH_pvu_506 5 51 0.000213609
Quercus lobata 7 5 CH_qlo_1510 3 3 0.000182968
Quercus lobata 4 5 CH_qlo_1755 3 4 0.000730959
Quercus lobata 11 5 CH_qlo_197 8 8 1.77002e-18
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1489 3 8 0.000950737
Rhododendron simsii chr04 5 CH_rsi_1006 3 7 0.000885198
Rhododendron simsii chr09 5 CH_rsi_479 4 7 0.000000771691
Salvia bowleyana GWHASIU00000006 5 CH_sbo_117 9 47 0.0000000000000214243
Salix brachista GWHAAZH00000019 5 CH_sbr_146 5 7 0.000000000131815
Simmondsia chinensis GWHAASQ00000006 5 CH_sci_17 9 9 2.21022e-21
Sechium edule LG05 5 CH_sed_256 3 3 0.0000101543
Sequoiadendron giganteum chr8 5 CH_sgi_1268 4 5 0.000000966333
Sequoiadendron giganteum chr1 5 CH_sgi_1429 4 7 0.00000674872
Sequoiadendron giganteum chr6 5 CH_sgi_296 11 55 1.69723e-16
Sequoiadendron giganteum chr7 5 CH_sgi_521 6 7 0.00000000000265389
Sequoiadendron giganteum chr11 5 CH_sgi_741 5 6 0.00000000163829
Sequoiadendron giganteum chr5 5 CH_sgi_853 5 7 0.00000000572723
Solanum lycopersicum SL4.0ch12 5 CH_sly_470 3 3 0.00000795817
Selaginella moellendorffii scaffold_17 5 CH_smo_259 3 6 0.000252985
Solanum pennellii Spenn-ch02 5 CH_spe_505 3 4 0.0000272917
Solanum tuberosum ST4.03ch06 5 CH_stu_313 4 4 0.0000000332091
Solanum tuberosum ST4.03ch01 5 CH_stu_549 3 3 0.0000360005
Selenicereus undatus Scaffold_33675 5 CH_sun_153 3 3 0.000025947
Selenicereus undatus Scaffold_33680 5 CH_sun_36 5 6 0.000000000123233
Trochodendron aralioides group3 5 CH_tar_731 3 7 0.000251247
Theobroma cacao Chromosome_5 5 CH_tca_173 5 6 0.0000000000851271
Theobroma cacao Chromosome_6 5 CH_tca_259 4 4 0.000000017621
Theobroma cacao Chromosome_9 5 CH_tca_260 4 4 0.000000017621
Tripterygium wilfordii NC_052244.1 5 CH_twi_442 3 5 0.000304725
Tripterygium wilfordii NC_052254.1 5 CH_twi_88 5 6 0.000000000141047
Utricularia gibba unitig_748 5 CH_ugi_40 3 3 0.0000000403928
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_161 4 6 0.0000000178633
Vigna mungo CM024072.1 5 CH_vmu_288 3 3 0.0000281507
Vigna mungo CM024073.1 5 CH_vmu_69 6 13 0.0000000000318651
Vanilla planifolia CM028156.1 5 CH_vpl_12 9 15 6.29199e-20
Vanilla planifolia CM028162.1 5 CH_vpl_6 13 24 6.79161e-30
Vitis vinifera chr10 5 CH_vvi_715 3 4 0.000459207
Aethionema arabicum LG-4 6 CH_aar_62 6 7 0.000000000000229103
Acer truncatum chr6 6 CH_acertr_16 9 10 5.97479e-23
Acer truncatum chr6 6 CH_acertr_287 4 5 0.000000107538
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 6 CH_arhy_146 8 10 8.5004e-17
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_187 7 8 0.0000000000000103139
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_332 6 10 0.000000000181978
Brassica carinata Contig846 6 CH_bca_1616 3 4 0.000242652
Brassica carinata ChrB03 6 CH_bca_482 4 4 0.0000000512561
Brassica napus A06 6 CH_bna_939 3 3 0.0000335015
Brassica napus C06 6 CH_bna_940 3 3 0.0000335015
Brassica rapa A01 6 CH_bra_624 3 8 0.000924057
Camellia sinensis var. sinensis Chr9 6 CH_camsi_1112 3 5 0.000141632
Camellia sinensis var. sinensis Chr5 6 CH_camsi_409 6 41 0.000000014835
Camellia sinensis var. sinensis Chr5 6 CH_camsi_820 4 15 0.0000123534
Capsicum annuum PGAv.1.6.scaffold179 6 CH_can_468 4 8 0.0000192121
Capsicum annuum PGAv.1.6.scaffold616 6 CH_can_498 4 9 0.0000345323
Cicer arietinum L. Ca_LG2_v3 6 CH_car_246 3 5 0.000120716
Corylus avellana 7 6 CH_cav_360 4 6 0.0000050537
Corylus avellana 2 6 CH_cav_38 9 15 1.02424e-17
Coffea canephora chr0 6 CH_ccan_46 6 46 0.00000000000292733
Coffea canephora chr0 6 CH_ccan_630 3 18 0.000434642
Citrus clementina scaffold_3 6 CH_ccl_104 8 9 0.00000000000000454511
Citrus clementina scaffold_9 6 CH_ccl_404 4 4 0.00000386205
Citrus clementina scaffold_2 6 CH_ccl_405 4 4 0.00000386205
Citrus clementina scaffold_4 6 CH_ccl_459 5 14 0.0000259596
Citrus clementina scaffold_2 6 CH_ccl_460 5 14 0.0000259596
Ceratophyllum demersum 2 6 CH_cde_498 2 2 0.000789796
Carya illinoinensis Chr01 6 CH_cil_113 7 10 0.000000000000028602
Carya illinoinensis Chr06 6 CH_cil_147 6 7 0.00000000000134862
Carya illinoinensis Chr04 6 CH_cil_334 4 4 0.000000116589
Carya illinoinensis Chr03 6 CH_cil_76 8 9 2.59894e-18
Citrullus lanatus CG_Chr02 6 CH_cla_75 4 5 0.00000001429
Cucumis melo chr01 6 CH_cme_199 4 9 0.000000818896
Chenopodium quinoa C_Quinoa_Scaffold_3333 6 CH_cqu_691 3 3 0.0000933521
Chenopodium quinoa C_Quinoa_Scaffold_2933 6 CH_cqu_692 3 3 0.0000933521
Capsella rubella scaffold_2 6 CH_cru_384 3 4 0.0000179557
Cucumis sativus L. chr7 6 CH_csa_270 3 3 0.00000852947
Daucus carota DCARv2_Chr1 6 CH_dca_286 3 3 0.00000222097
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_31 10 61 9.10848e-19
Eucalyptus grandis Chr01 6 CH_egr_116 12 18 8.39387e-24
Eucalyptus grandis Chr08 6 CH_egr_1300 3 3 0.000438403
Eucalyptus grandis Chr08 6 CH_egr_179 9 10 5.08595e-19
Eucalyptus grandis Chr01 6 CH_egr_552 5 5 0.00000000225518
Eutrema salsugineum scaffold_2 6 CH_esa_147 6 45 0.0000000249548
Fragaria x ananassa Fvb7-2 6 CH_fan_127 5 5 0.00000000000988144
Fragaria x ananassa Fvb7-2 6 CH_fan_261 4 5 0.0000000164312
Fragaria x ananassa Fvb3-3 6 CH_fan_922 4 25 0.000205725
Gossypium hirsutum D10 6 CH_ghi_295 5 6 0.000000000256914
Gossypium hirsutum D12 6 CH_ghi_811 3 3 0.000056034
Glycine max Gm07 6 CH_gma_570 3 3 0.000047758
Glycine max Gm20 6 CH_gma_571 3 3 0.000047758
Glycine max Gm13 6 CH_gma_982 3 6 0.000953108
Gossypium raimondii Chr11 6 CH_gra_46 9 11 2.99713e-21
Lonicera japonica GWHAAZE00000001 6 CH_lonja_108 7 7 2.81756e-19
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_654 3 6 0.000140201
Magnolia biondii Chr08 6 CH_mbi_1100 4 18 0.000471366
Magnolia biondii Chr15 6 CH_mbi_427 6 31 0.000000196117
Magnolia biondii Chr18 6 CH_mbi_569 4 6 0.00000234113
Magnolia biondii Chr18 6 CH_mbi_838 3 3 0.00011502
Malus domestica Chr10 6 CH_mdo_1147 3 4 0.00026602
Malus domestica Chr07 6 CH_mdo_1148 3 4 0.00026602
Malus domestica Chr01 6 CH_mdo_139 7 14 0.000000000000240257
Malus domestica Chr05 6 CH_mdo_316 5 8 0.00000000396986
Malus domestica Chr01 6 CH_mdo_851 5 40 0.000045385
Malus domestica Chr01 6 CH_mdo_872 3 3 0.0000665583
Malus domestica Chr17 6 CH_mdo_873 3 3 0.0000665583
Manihot esculenta Chromosome13 6 CH_mes_18 15 18 1.64182e-38
Marchantia polymorpha scaffold_44 6 CH_mpo_113 3 3 0.0000124421
Medicago truncatula chr7 6 CH_mtr_1009 3 3 0.0000823187
Nicotiana tabacum Nitab4.5_0000009 6 CH_nta_121 3 3 0.00000151713
Nicotiana tabacum Nitab4.5_0000107 6 CH_nta_163 3 6 0.0000303152
Olea europaea chr16 6 CH_oeu_173 3 3 0.000000512889
Oryza sativa ssp. japonica chr04 6 CH_osa_532 3 4 0.000082957
Petunia axillaris Peaxi162Scf00010 6 CH_pax_330 3 3 0.00000987543
Prunus persica Pp02 6 CH_ppe_102 8 12 9.76834e-17
Prunus persica Pp08 6 CH_ppe_196 6 11 0.0000000000659604
Prunus persica Pp03 6 CH_ppe_241 6 16 0.00000000113726
Populus trichocarpa Chr19 6 CH_ptr_511 3 3 0.0000357816
Phaseolus vulgaris Chr09 6 CH_pvu_34 10 11 1.69503e-24
Phaseolus vulgaris Chr11 6 CH_pvu_506 5 51 0.000213609
Quercus lobata 7 6 CH_qlo_1510 3 3 0.000182968
Quercus lobata 4 6 CH_qlo_1755 3 4 0.000730959
Quercus lobata 11 6 CH_qlo_197 8 8 1.77002e-18
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1489 3 8 0.000950737
Rhododendron simsii chr04 6 CH_rsi_1006 3 7 0.000885198
Rhododendron simsii chr09 6 CH_rsi_479 4 7 0.000000771691
Salvia bowleyana GWHASIU00000006 6 CH_sbo_117 9 47 0.0000000000000214243
Salix brachista GWHAAZH00000019 6 CH_sbr_146 5 7 0.000000000131815
Simmondsia chinensis GWHAASQ00000006 6 CH_sci_17 9 9 2.21022e-21
Sechium edule LG05 6 CH_sed_256 3 3 0.0000101543
Sequoiadendron giganteum chr8 6 CH_sgi_1268 4 5 0.000000966333
Sequoiadendron giganteum chr1 6 CH_sgi_1429 4 7 0.00000674872
Sequoiadendron giganteum chr6 6 CH_sgi_296 11 55 1.69723e-16
Sequoiadendron giganteum chr7 6 CH_sgi_521 6 7 0.00000000000265389
Sequoiadendron giganteum chr11 6 CH_sgi_741 5 6 0.00000000163829
Sequoiadendron giganteum chr5 6 CH_sgi_853 5 7 0.00000000572723
Solanum lycopersicum SL4.0ch12 6 CH_sly_470 3 3 0.00000795817
Selaginella moellendorffii scaffold_17 6 CH_smo_259 3 6 0.000252985
Solanum pennellii Spenn-ch02 6 CH_spe_505 3 4 0.0000272917
Solanum tuberosum ST4.03ch06 6 CH_stu_313 4 4 0.0000000332091
Solanum tuberosum ST4.03ch01 6 CH_stu_549 3 3 0.0000360005
Selenicereus undatus Scaffold_33675 6 CH_sun_153 3 3 0.000025947
Selenicereus undatus Scaffold_33680 6 CH_sun_36 5 6 0.000000000123233
Trochodendron aralioides group3 6 CH_tar_731 3 7 0.000251247
Theobroma cacao Chromosome_5 6 CH_tca_173 5 6 0.0000000000851271
Theobroma cacao Chromosome_6 6 CH_tca_259 4 4 0.000000017621
Theobroma cacao Chromosome_9 6 CH_tca_260 4 4 0.000000017621
Tripterygium wilfordii NC_052244.1 6 CH_twi_442 3 5 0.000304725
Tripterygium wilfordii NC_052254.1 6 CH_twi_88 5 6 0.000000000141047
Utricularia gibba unitig_748 6 CH_ugi_40 3 3 0.0000000403928
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_161 4 6 0.0000000178633
Vigna mungo CM024072.1 6 CH_vmu_288 3 3 0.0000281507
Vigna mungo CM024073.1 6 CH_vmu_69 6 13 0.0000000000318651
Vanilla planifolia CM028156.1 6 CH_vpl_12 9 15 6.29199e-20
Vanilla planifolia CM028162.1 6 CH_vpl_6 13 24 6.79161e-30
Vitis vinifera chr10 6 CH_vvi_715 3 4 0.000459207

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001