Functional clusters

Information

  • Type InterPro
  • Description Thionin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 5 CH_aly_519 2 2 0.000198013
Brassica carinata ChrB01 5 CH_bca_35 6 6 1.72354e-19
Cannabis sativa NC_044370.1 5 CH_cansat_298 3 11 0.00000452559
Cardamine hirsuta Chr6 5 CH_chi_462 3 11 0.0000661334
Capsella rubella scaffold_7 5 CH_cru_18 9 10 5.42808e-23
Capsella rubella scaffold_3 5 CH_cru_193 4 4 0.0000000205813
Oryza sativa ssp. japonica chr06 5 CH_osa_334 3 15 0.00000190303
Papaver somniferum NW_020620714.1 5 CH_pso_607 3 6 0.0000018269
Salvia bowleyana GWHASIU00000003 5 CH_sbo_246 5 45 0.00000000984991
Arabidopsis lyrata scaffold_3 6 CH_aly_519 2 2 0.000198013
Brassica carinata ChrB01 6 CH_bca_35 6 6 1.72354e-19
Cannabis sativa NC_044370.1 6 CH_cansat_298 3 11 0.00000452559
Cardamine hirsuta Chr6 6 CH_chi_462 3 11 0.0000661334
Capsella rubella scaffold_7 6 CH_cru_18 9 10 5.42808e-23
Capsella rubella scaffold_3 6 CH_cru_193 4 4 0.0000000205813
Oryza sativa ssp. japonica chr06 6 CH_osa_334 3 15 0.00000190303
Papaver somniferum NW_020620714.1 6 CH_pso_607 3 6 0.0000018269
Salvia bowleyana GWHASIU00000003 6 CH_sbo_246 5 45 0.00000000984991

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001