Functional clusters

Information

  • Type InterPro
  • Description Globin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 5 CH_acertr_289 3 4 0.000000119273
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 5 CH_amhyb_304 2 2 0.000252525
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 5 CH_arhy_459 3 3 0.0000000470566
Brassica carinata ChrC06 5 CH_bca_135 4 5 0.000000000000732609
Brassica napus C07 5 CH_bna_1216 2 2 0.000278425
Brassica oleracea C7 5 CH_bol_655 2 2 0.000196117
Coffea canephora chr2 5 CH_ccan_176 3 18 0.0000000990295
Citrus clementina scaffold_8 5 CH_ccl_519 2 2 0.0000820311
Cardamine hirsuta Chr3 5 CH_chi_597 2 2 0.000207361
Corchorus olitorius AWUE01016384.1 5 CH_col_137 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_3333 5 CH_cqu_986 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3670 5 CH_cqu_987 2 2 0.000710732
Durio zibethinus NW_019167849.1 5 CH_dzi_379 2 2 0.0000463489
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_525 2 2 0.0000448722
Eucalyptus grandis Chr09 5 CH_egr_1172 2 2 0.000175582
Glycine max Gm10 5 CH_gma_123 4 4 0.00000000000574176
Glycine max Gm11 5 CH_gma_936 2 2 0.00079707
Gossypium raimondii Chr12 5 CH_gra_594 2 3 0.000482475
Lupinus albus Lalb_Chr01 5 CH_lal_755 2 2 0.000787236
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_604 2 2 0.0000514007
Magnolia biondii Chr19 5 CH_mbi_901 2 2 0.000145698
Malus domestica Chr00 5 CH_mdo_945 2 2 0.000113763
Manihot esculenta Chromosome17 5 CH_mes_574 2 2 0.000183189
Marchantia polymorpha scaffold_104 5 CH_mpo_224 2 3 0.000993889
Medicago truncatula chr5 5 CH_mtr_500 5 41 0.0000000318676
Olea europaea chr2 5 CH_oeu_130 3 6 0.0000000854746
Oryza sativa ssp. japonica chr03 5 CH_osa_232 3 3 0.0000000418381
Phaseolus vulgaris Chr07 5 CH_pvu_83 5 6 0.0000000000000275416
Quercus lobata 11 5 CH_qlo_1569 2 2 0.000309773
Simmondsia chinensis GWHAASQ00000025 5 CH_sci_445 2 2 0.000510856
Sequoiadendron giganteum chr6 5 CH_sgi_1618 2 2 0.0000487151
Theobroma cacao Chromosome_2 5 CH_tca_604 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_308 3 5 0.0000030075
Vigna mungo CM024076.1 5 CH_vmu_431 2 2 0.000193842
Acer truncatum chr5 6 CH_acertr_289 3 4 0.000000119273
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 6 CH_amhyb_304 2 2 0.000252525
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 6 CH_arhy_459 3 3 0.0000000470566
Brassica carinata ChrC06 6 CH_bca_135 4 5 0.000000000000732609
Brassica napus C07 6 CH_bna_1216 2 2 0.000278425
Brassica oleracea C7 6 CH_bol_655 2 2 0.000196117
Coffea canephora chr2 6 CH_ccan_176 3 18 0.0000000990295
Citrus clementina scaffold_8 6 CH_ccl_519 2 2 0.0000820311
Cardamine hirsuta Chr3 6 CH_chi_597 2 2 0.000207361
Corchorus olitorius AWUE01016384.1 6 CH_col_137 2 2 0.000292099
Chenopodium quinoa C_Quinoa_Scaffold_3333 6 CH_cqu_986 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3670 6 CH_cqu_987 2 2 0.000710732
Durio zibethinus NW_019167849.1 6 CH_dzi_379 2 2 0.0000463489
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_525 2 2 0.0000448722
Eucalyptus grandis Chr09 6 CH_egr_1172 2 2 0.000175582
Glycine max Gm10 6 CH_gma_123 4 4 0.00000000000574176
Glycine max Gm11 6 CH_gma_936 2 2 0.00079707
Gossypium raimondii Chr12 6 CH_gra_594 2 3 0.000482475
Lupinus albus Lalb_Chr01 6 CH_lal_755 2 2 0.000787236
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_604 2 2 0.0000514007
Magnolia biondii Chr19 6 CH_mbi_901 2 2 0.000145698
Malus domestica Chr00 6 CH_mdo_945 2 2 0.000113763
Manihot esculenta Chromosome17 6 CH_mes_574 2 2 0.000183189
Marchantia polymorpha scaffold_104 6 CH_mpo_224 2 3 0.000993889
Medicago truncatula chr5 6 CH_mtr_500 5 41 0.0000000318676
Olea europaea chr2 6 CH_oeu_130 3 6 0.0000000854746
Oryza sativa ssp. japonica chr03 6 CH_osa_232 3 3 0.0000000418381
Phaseolus vulgaris Chr07 6 CH_pvu_83 5 6 0.0000000000000275416
Quercus lobata 11 6 CH_qlo_1569 2 2 0.000309773
Simmondsia chinensis GWHAASQ00000025 6 CH_sci_445 2 2 0.000510856
Sequoiadendron giganteum chr6 6 CH_sgi_1618 2 2 0.0000487151
Theobroma cacao Chromosome_2 6 CH_tca_604 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_308 3 5 0.0000030075
Vigna mungo CM024076.1 6 CH_vmu_431 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001