Functional clusters
Information
- Type InterPro
- Description Flavin monooxygenase FMO
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_221 | 4 | 8 | 0.0000000823288 |
| Arabidopsis lyrata | scaffold_2 | 5 | CH_aly_58 | 6 | 8 | 0.00000000000000394915 |
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_208 | 3 | 3 | 0.0000021226 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_209 | 3 | 3 | 0.0000021226 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_241 | 4 | 16 | 0.000000304982 |
| Brassica carinata | ChrC07 | 5 | CH_bca_1234 | 3 | 6 | 0.0000448813 |
| Brassica carinata | ChrC04 | 5 | CH_bca_162 | 5 | 7 | 0.00000000000323092 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1755 | 4 | 66 | 0.000426694 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_314 | 4 | 5 | 0.000000000715822 |
| Cannabis sativa | NC_044370.1 | 5 | CH_cansat_352 | 3 | 5 | 0.0000294096 |
| Corchorus olitorius | AWUE01023859.1 | 5 | CH_col_85 | 3 | 3 | 0.00000448004 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4480 | 5 | CH_cqu_525 | 3 | 3 | 0.00000681618 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2751 | 5 | CH_cqu_526 | 3 | 3 | 0.00000681618 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_208 | 4 | 7 | 0.0000000410459 |
| Capsella rubella | scaffold_2 | 5 | CH_cru_91 | 5 | 5 | 0.000000000000429198 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_961 | 3 | 3 | 0.0000133597 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_962 | 3 | 3 | 0.0000133597 |
| Eutrema salsugineum | scaffold_8 | 5 | CH_esa_81 | 5 | 7 | 0.00000000000681367 |
| Fragaria vesca | Fvb5 | 5 | CH_fve_428 | 3 | 3 | 0.00000291523 |
| Helianthus annuus | HanXRQChr04 | 5 | CH_han_762 | 3 | 3 | 0.0000257146 |
| Helianthus annuus | HanXRQChr05 | 5 | CH_han_873 | 3 | 4 | 0.000102798 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 5 | CH_lsa_464 | 3 | 3 | 0.00000269494 |
| Malus domestica | Chr10 | 5 | CH_mdo_255 | 4 | 4 | 0.000000000297757 |
| Malus domestica | Chr14 | 5 | CH_mdo_875 | 3 | 8 | 0.0000675766 |
| Olea europaea | chr5 | 5 | CH_oeu_97 | 4 | 6 | 0.00000000489183 |
| Oryza sativa ssp. japonica | chr07 | 5 | CH_osa_207 | 4 | 5 | 0.00000000856179 |
| Oryza sativa ssp. japonica | chr09 | 5 | CH_osa_416 | 3 | 4 | 0.0000162109 |
| Quercus lobata | 11 | 5 | CH_qlo_718 | 5 | 20 | 0.0000000276327 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_363 | 5 | 13 | 0.000000000282942 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_397 | 3 | 5 | 0.0000051219 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1552 | 3 | 11 | 0.0000328624 |
| Schrenkiella parvula | ch2-1 | 5 | CH_spa_67 | 4 | 5 | 0.00000000153727 |
| Tripterygium wilfordii | NC_052235.1 | 5 | CH_twi_153 | 4 | 6 | 0.0000000377537 |
| Tripterygium wilfordii | NC_052240.1 | 5 | CH_twi_241 | 4 | 14 | 0.00000251168 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_625 | 2 | 2 | 0.000969211 |
| Vigna mungo | CM024070.1 | 5 | CH_vmu_626 | 2 | 2 | 0.000969211 |
| Vitis vinifera | chr2 | 5 | CH_vvi_211 | 4 | 4 | 0.0000000051177 |
| Zea mays | 4 | 5 | CH_zma_98 | 4 | 4 | 0.000000000729938 |
| Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_221 | 4 | 8 | 0.0000000823288 |
| Arabidopsis lyrata | scaffold_2 | 6 | CH_aly_58 | 6 | 8 | 0.00000000000000394915 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_208 | 3 | 3 | 0.0000021226 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_209 | 3 | 3 | 0.0000021226 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_241 | 4 | 16 | 0.000000304982 |
| Brassica carinata | ChrC07 | 6 | CH_bca_1234 | 3 | 6 | 0.0000448813 |
| Brassica carinata | ChrC04 | 6 | CH_bca_162 | 5 | 7 | 0.00000000000323092 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1755 | 4 | 66 | 0.000426694 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_314 | 4 | 5 | 0.000000000715822 |
| Cannabis sativa | NC_044370.1 | 6 | CH_cansat_352 | 3 | 5 | 0.0000294096 |
| Cucumis melo | chr06 | 6 | CH_cme_133 | 4 | 6 | 0.0000000133667 |
| Corchorus olitorius | AWUE01023859.1 | 6 | CH_col_85 | 3 | 3 | 0.00000448004 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4480 | 6 | CH_cqu_525 | 3 | 3 | 0.00000681618 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2751 | 6 | CH_cqu_526 | 3 | 3 | 0.00000681618 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_208 | 4 | 7 | 0.0000000410459 |
| Capsella rubella | scaffold_2 | 6 | CH_cru_91 | 5 | 5 | 0.000000000000429198 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_961 | 3 | 3 | 0.0000133597 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_962 | 3 | 3 | 0.0000133597 |
| Eutrema salsugineum | scaffold_8 | 6 | CH_esa_81 | 5 | 7 | 0.00000000000681367 |
| Fragaria x ananassa | Fvb5-1 | 6 | CH_fan_510 | 3 | 3 | 0.00000254736 |
| Fragaria vesca | Fvb5 | 6 | CH_fve_428 | 3 | 3 | 0.00000291523 |
| Helianthus annuus | HanXRQChr04 | 6 | CH_han_762 | 3 | 3 | 0.0000257146 |
| Helianthus annuus | HanXRQChr05 | 6 | CH_han_873 | 3 | 4 | 0.000102798 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 6 | CH_lsa_464 | 3 | 3 | 0.00000269494 |
| Malus domestica | Chr10 | 6 | CH_mdo_255 | 4 | 4 | 0.000000000297757 |
| Malus domestica | Chr14 | 6 | CH_mdo_875 | 3 | 8 | 0.0000675766 |
| Olea europaea | chr5 | 6 | CH_oeu_97 | 4 | 6 | 0.00000000489183 |
| Oryza sativa ssp. japonica | chr07 | 6 | CH_osa_207 | 4 | 5 | 0.00000000856179 |
| Oryza sativa ssp. japonica | chr09 | 6 | CH_osa_416 | 3 | 4 | 0.0000162109 |
| Quercus lobata | 11 | 6 | CH_qlo_718 | 5 | 20 | 0.0000000276327 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_363 | 5 | 13 | 0.000000000282942 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_397 | 3 | 5 | 0.0000051219 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1552 | 3 | 11 | 0.0000328624 |
| Schrenkiella parvula | ch2-1 | 6 | CH_spa_67 | 4 | 5 | 0.00000000153727 |
| Tripterygium wilfordii | NC_052235.1 | 6 | CH_twi_153 | 4 | 6 | 0.0000000377537 |
| Tripterygium wilfordii | NC_052240.1 | 6 | CH_twi_241 | 4 | 14 | 0.00000251168 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_625 | 2 | 2 | 0.000969211 |
| Vigna mungo | CM024070.1 | 6 | CH_vmu_626 | 2 | 2 | 0.000969211 |
| Vitis vinifera | chr2 | 6 | CH_vvi_211 | 4 | 4 | 0.0000000051177 |
| Zea mays | 4 | 6 | CH_zma_98 | 4 | 4 | 0.000000000729938 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |