Functional clusters

Information

  • Type InterPro
  • Description Photosystem antenna protein-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 5 CH_aly_379 4 76 0.0000165009
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 5 CH_amhyb_156 4 41 0.00000270732
Brassica napus BNapus_Darmor_BZH_scaffold_253 5 CH_bna_1245 3 19 0.000279993
Brassica oleracea C7 5 CH_bol_869 3 14 0.000773832
Beta vulgaris Scaffold_0015 5 CH_bvu_298 4 18 0.0000200432
Beta vulgaris Chr9_EL10_PGA_scaffold8 5 CH_bvu_395 3 6 0.000198946
Lonicera japonica GWHAAZE00000002 5 CH_lonja_606 4 38 0.00000596307
Olea europaea chr19 5 CH_oeu_255 3 9 0.0000125577
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1388 2 2 0.000597979
Sequoiadendron giganteum chr5 5 CH_sgi_1353 5 23 0.00000239506
Sequoiadendron giganteum chr1 5 CH_sgi_649 7 28 0.0000000000900765
Solanum tuberosum ST4.03ch07 5 CH_stu_812 5 34 0.000351577
Arabidopsis lyrata scaffold_2 6 CH_aly_379 4 76 0.0000165009
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 6 CH_amhyb_156 4 41 0.00000270732
Brassica napus BNapus_Darmor_BZH_scaffold_253 6 CH_bna_1245 3 19 0.000279993
Brassica oleracea C7 6 CH_bol_869 3 14 0.000773832
Beta vulgaris Scaffold_0015 6 CH_bvu_298 4 18 0.0000200432
Beta vulgaris Chr9_EL10_PGA_scaffold8 6 CH_bvu_395 3 6 0.000198946
Lonicera japonica GWHAAZE00000002 6 CH_lonja_606 4 38 0.00000596307
Olea europaea chr19 6 CH_oeu_255 3 9 0.0000125577
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1388 2 2 0.000597979
Sequoiadendron giganteum chr5 6 CH_sgi_1353 5 23 0.00000239506
Sequoiadendron giganteum chr1 6 CH_sgi_649 7 28 0.0000000000900765
Solanum tuberosum ST4.03ch07 6 CH_stu_812 5 34 0.000351577

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001