Functional clusters

Information

  • Type InterPro
  • Description Isochorismatase-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 5 CH_acertr_737 2 2 0.000211491
Cannabis sativa NC_044371.1 5 CH_cansat_577 2 2 0.000656642
Chara braunii BFEA01000072 5 CH_cbr_300 2 2 0.000431562
Durio zibethinus NW_019167915.1 5 CH_dzi_571 2 2 0.000695233
Erythranthe guttata scaffold_4 5 CH_egut_718 2 2 0.000728147
Glycine max Gm08 5 CH_gma_861 2 2 0.000569336
Lotus japonicus chr5 5 CH_lja_590 2 2 0.000715077
Medicago truncatula chr1 5 CH_mtr_684 3 6 0.00000101267
Oryza sativa ssp. japonica chr02 5 CH_osa_632 2 2 0.000316874
Petunia axillaris Peaxi162Scf00015 5 CH_pax_617 2 2 0.000422134
Phaseolus vulgaris Chr10 5 CH_pvu_668 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1316 2 2 0.000398653
Sechium edule LG09 5 CH_sed_161 3 3 0.000000152696
Trochodendron aralioides group8 5 CH_tar_866 2 2 0.000600366
Tarenaya hassleriana NW_010966021.1 5 CH_tha_237 2 2 0.000209541
Vitis vinifera chr9 5 CH_vvi_761 2 2 0.00076063
Acer truncatum chr1 6 CH_acertr_737 2 2 0.000211491
Cannabis sativa NC_044371.1 6 CH_cansat_577 2 2 0.000656642
Chara braunii BFEA01000072 6 CH_cbr_300 2 2 0.000431562
Durio zibethinus NW_019167915.1 6 CH_dzi_571 2 2 0.000695233
Erythranthe guttata scaffold_4 6 CH_egut_718 2 2 0.000728147
Glycine max Gm08 6 CH_gma_861 2 2 0.000569336
Lotus japonicus chr5 6 CH_lja_590 2 2 0.000715077
Medicago truncatula chr1 6 CH_mtr_684 3 6 0.00000101267
Oryza sativa ssp. japonica chr02 6 CH_osa_632 2 2 0.000316874
Petunia axillaris Peaxi162Scf00015 6 CH_pax_617 2 2 0.000422134
Phaseolus vulgaris Chr10 6 CH_pvu_668 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1316 2 2 0.000398653
Sechium edule LG09 6 CH_sed_161 3 3 0.000000152696
Trochodendron aralioides group8 6 CH_tar_866 2 2 0.000600366
Tarenaya hassleriana NW_010966021.1 6 CH_tha_237 2 2 0.000209541
Vitis vinifera chr9 6 CH_vvi_761 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001