Functional clusters
Information
- Type InterPro
- Description Rab GDI protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Avicennia marina | ScioBoG_4088_HRSCAF_4107 | 5 | CH_ama_219 | 2 | 3 | 0.00077594 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_642 | 3 | 3 | 0.0000000205534 |
| Manihot esculenta | Chromosome07 | 5 | CH_mes_647 | 3 | 25 | 0.000449046 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_242 | 3 | 5 | 0.000000337789 |
| Quercus lobata | 10 | 5 | CH_qlo_1434 | 2 | 2 | 0.000154887 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_1381 | 2 | 2 | 0.000597979 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_774 | 2 | 2 | 0.000193592 |
| Selenicereus undatus | Scaffold_33678 | 5 | CH_sun_317 | 2 | 2 | 0.000435983 |
| Avicennia marina | ScioBoG_4088_HRSCAF_4107 | 6 | CH_ama_219 | 2 | 3 | 0.00077594 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_642 | 3 | 3 | 0.0000000205534 |
| Manihot esculenta | Chromosome07 | 6 | CH_mes_647 | 3 | 25 | 0.000449046 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_242 | 3 | 5 | 0.000000337789 |
| Quercus lobata | 10 | 6 | CH_qlo_1434 | 2 | 2 | 0.000154887 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_1381 | 2 | 2 | 0.000597979 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_774 | 2 | 2 | 0.000193592 |
| Selenicereus undatus | Scaffold_33678 | 6 | CH_sun_317 | 2 | 2 | 0.000435983 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |