Functional clusters

Information

  • Type InterPro
  • Description Aspartate/other aminotransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 5 CH_aly_716 2 2 0.000990066
Cannabis sativa NC_044370.1 5 CH_cansat_374 3 15 0.0000587825
Corchorus olitorius AWUE01016488.1 5 CH_col_204 2 2 0.000876296
Eutrema salsugineum scaffold_10 5 CH_esa_44 6 8 7.45279e-16
Fragaria vesca Fvb2 5 CH_fve_703 2 2 0.000353461
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1142 2 2 0.000598874
Malus domestica Chr08 5 CH_mdo_479 3 3 0.000000181193
Manihot esculenta Chromosome03 5 CH_mes_714 2 2 0.000915947
Medicago truncatula chr4 5 CH_mtr_1274 2 2 0.000410863
Prunus persica Pp01 5 CH_ppe_753 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1315 2 2 0.000398653
Sapria himalayana scaffold28_7511268 5 CH_shi_256 2 2 0.0000571804
Vanilla planifolia CM028162.1 5 CH_vpl_211 3 6 0.00000163744
Arabidopsis lyrata scaffold_2 6 CH_aly_716 2 2 0.000990066
Cannabis sativa NC_044370.1 6 CH_cansat_374 3 15 0.0000587825
Corchorus olitorius AWUE01016488.1 6 CH_col_204 2 2 0.000876296
Eutrema salsugineum scaffold_10 6 CH_esa_44 6 8 7.45279e-16
Fragaria x ananassa Fvb2-4 6 CH_fan_1239 2 2 0.000832663
Fragaria x ananassa Fvb2-1 6 CH_fan_1240 2 2 0.000832663
Fragaria vesca Fvb2 6 CH_fve_703 2 2 0.000353461
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1142 2 2 0.000598874
Malus domestica Chr08 6 CH_mdo_479 3 3 0.000000181193
Manihot esculenta Chromosome03 6 CH_mes_714 2 2 0.000915947
Medicago truncatula chr4 6 CH_mtr_1274 2 2 0.000410863
Prunus persica Pp01 6 CH_ppe_753 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1315 2 2 0.000398653
Sapria himalayana scaffold28_7511268 6 CH_shi_256 2 2 0.0000571804
Vanilla planifolia CM028162.1 6 CH_vpl_211 3 6 0.00000163744

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001