Functional clusters
Information
- Type InterPro
- Description Beta-ketoacyl synthase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00021 | 5 | CH_atr_628 | 2 | 2 | 0.000794407 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_606 | 2 | 2 | 0.000984963 |
| Citrus clementina | scaffold_7 | 5 | CH_ccl_189 | 5 | 15 | 0.000000000128303 |
| Carica papaya | supercontig_132 | 5 | CH_cpa_558 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2888 | 5 | CH_cqu_1057 | 2 | 2 | 0.000995025 |
| Durio zibethinus | NW_019167982.1 | 5 | CH_dzi_120 | 4 | 5 | 0.000000000739213 |
| Medicago truncatula | chr8 | 5 | CH_mtr_292 | 4 | 4 | 0.0000000000262187 |
| Quercus lobata | 11 | 5 | CH_qlo_885 | 3 | 3 | 0.00000047981 |
| Amborella trichopoda | AmTr_v1.0_scaffold00021 | 6 | CH_atr_628 | 2 | 2 | 0.000794407 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_606 | 2 | 2 | 0.000984963 |
| Citrus clementina | scaffold_7 | 6 | CH_ccl_189 | 5 | 15 | 0.000000000128303 |
| Carica papaya | supercontig_132 | 6 | CH_cpa_558 | 2 | 2 | 0.000570396 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2888 | 6 | CH_cqu_1057 | 2 | 2 | 0.000995025 |
| Durio zibethinus | NW_019167982.1 | 6 | CH_dzi_120 | 4 | 5 | 0.000000000739213 |
| Medicago truncatula | chr8 | 6 | CH_mtr_292 | 4 | 4 | 0.0000000000262187 |
| Quercus lobata | 11 | 6 | CH_qlo_885 | 3 | 3 | 0.00000047981 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |