Functional clusters

Information

  • Type InterPro
  • Description EGF-like domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group26 5 CH_ach_21 5 6 0.000000000000504255
Arabidopsis lyrata scaffold_1 5 CH_aly_46 5 6 8.54233e-16
Avicennia marina ScioBoG_12795_HRSCAF_12848 5 CH_ama_54 3 3 0.000000624499
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 5 CH_amhyb_47 6 22 0.000000000130757
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_252 6 33 0.00000000000297903
Arabidopsis thaliana Chr1 5 CH_ath_52 5 14 0.0000000000000101148
Brassica carinata ChrC07 5 CH_bca_175 5 8 0.00000000000576572
Brassica carinata ChrB03 5 CH_bca_66 6 7 1.61838e-16
Brassica carinata ChrC05 5 CH_bca_997 3 4 0.00000712713
Brassica napus A06 5 CH_bna_268 4 6 0.000000000880436
Brassica napus C08 5 CH_bna_791 3 7 0.00000843142
Brassica oleracea C8 5 CH_bol_80 5 12 0.00000000000170776
Brassica rapa A06 5 CH_bra_174 3 3 0.000000232236
Brassica rapa A08 5 CH_bra_240 3 5 0.00000232181
Beta vulgaris Chr6_EL10_PGA_scaffold0 5 CH_bvu_187 4 5 0.000000174167
Beta vulgaris Chr3_EL10_PGA_scaffold7 5 CH_bvu_68 8 38 0.00000000000124479
Camellia sinensis var. sinensis Chr4 5 CH_camsi_879 4 27 0.0000301509
Cannabis sativa NC_044378.1 5 CH_cansat_141 4 5 0.00000000303605
Cannabis sativa NC_044378.1 5 CH_cansat_217 4 11 0.000000200056
Cannabis sativa NC_044371.1 5 CH_cansat_273 3 3 0.00000184982
Capsicum annuum PGAv.1.6.scaffold203 5 CH_can_435 3 7 0.00000716217
Cardamine hirsuta Chr1 5 CH_chi_299 3 3 0.000000401335
Carya illinoinensis Chr05 5 CH_cil_93 8 16 5.46844e-16
Carica papaya supercontig_64 5 CH_cpa_289 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_42 10 18 5.86722e-21
Chenopodium quinoa C_Quinoa_Scaffold_2370 5 CH_cqu_54 8 9 1.14337e-18
Chenopodium quinoa C_Quinoa_Scaffold_2187 5 CH_cqu_680 3 3 0.0000744257
Capsella rubella scaffold_1 5 CH_cru_84 5 7 0.0000000000000945251
Davidia involucrata GWHABJS00000011 5 CH_din_20 11 19 2.91235e-24
Davidia involucrata GWHABJS00000002 5 CH_din_6 14 25 9.63323e-32
Davidia involucrata GWHABJS00000001 5 CH_din_619 3 4 0.000212789
Durio zibethinus NW_019167949.1 5 CH_dzi_325 3 6 0.0000141709
Durio zibethinus NW_019167937.1 5 CH_dzi_67 6 24 0.000000000000597131
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_126 5 6 0.000000000155107
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_710 3 5 0.000346265
Eucalyptus grandis Chr06 5 CH_egr_701 4 7 0.000000101876
Erythranthe guttata scaffold_10 5 CH_egut_218 4 4 0.00000000693249
Eutrema salsugineum scaffold_5 5 CH_esa_165 3 3 0.0000000869853
Fragaria vesca Fvb7 5 CH_fve_455 3 3 0.00000593457
Gossypium hirsutum A05 5 CH_ghi_214 5 5 0.000000000000904911
Gossypium hirsutum D05 5 CH_ghi_357 4 4 0.00000000233714
Gossypium hirsutum D02 5 CH_ghi_44 11 15 1.89621e-30
Gossypium hirsutum A02 5 CH_ghi_450 4 7 0.0000000817205
Gossypium raimondii Chr09 5 CH_gra_182 4 4 0.00000000110024
Helianthus annuus HanXRQChr03 5 CH_han_271 5 8 0.00000000035256
Helianthus annuus HanXRQChr13 5 CH_han_423 4 5 0.0000000509628
Helianthus annuus HanXRQChr16 5 CH_han_846 3 4 0.0000639411
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_240 4 4 0.00000000197403
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_306 4 6 0.0000000295895
Lactuca sativa Lsat_1_v8_lg_9 5 CH_lsa_392 4 10 0.000000413666
Malus domestica Chr05 5 CH_mdo_331 4 8 0.00000000566566
Malus domestica Chr10 5 CH_mdo_622 4 30 0.00000221127
Manihot esculenta Chromosome02 5 CH_mes_42 9 11 3.01861e-26
Medicago truncatula chr3 5 CH_mtr_148 6 7 3.42316e-16
Nicotiana tabacum Nitab4.5_0000261 5 CH_nta_82 4 13 0.0000000990334
Olea europaea chr11 5 CH_oeu_262 3 3 0.000019212
Petunia axillaris Peaxi162Scf01132 5 CH_pax_147 4 5 0.00000000950481
Punica granatum NC_045134.1 5 CH_pgr_168 4 10 0.00000000399052
Prunus persica Pp04 5 CH_ppe_15 13 28 4.02147e-33
Papaver somniferum NC_039363.1 5 CH_pso_1117 3 4 0.000382158
Papaver somniferum NC_039366.1 5 CH_pso_923 3 3 0.0000956125
Papaver somniferum NC_039363.1 5 CH_pso_924 3 3 0.0000956125
Populus trichocarpa Chr02 5 CH_ptr_516 3 5 0.0000408643
Populus trichocarpa Chr04 5 CH_ptr_60 9 26 2.67279e-20
Quercus lobata 4 5 CH_qlo_713 5 15 0.0000000226798
Salvia bowleyana GWHASIU00000005 5 CH_sbo_79 8 16 1.76532e-18
Salix brachista GWHAAZH00000004 5 CH_sbr_187 5 12 0.00000000396673
Salix brachista GWHAAZH00000002 5 CH_sbr_86 6 8 0.0000000000000841867
Sequoiadendron giganteum chr3 5 CH_sgi_647 5 5 0.0000000000805573
Solanum lycopersicum SL4.0ch09 5 CH_sly_173 4 4 0.000000000127398
Solanum pennellii Spenn-ch09 5 CH_spe_311 3 3 0.000000249282
Solanum tuberosum ST4.03ch09 5 CH_stu_181 5 8 0.0000000000247979
Solanum tuberosum ST4.03ch10 5 CH_stu_190 5 9 0.0000000000557784
Solanum tuberosum ST4.03ch09 5 CH_stu_270 4 5 0.00000000617549
Trochodendron aralioides group5 5 CH_tar_119 5 8 0.0000000000633873
Theobroma cacao Chromosome_8 5 CH_tca_112 5 8 0.000000000000253745
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_106 4 4 0.000000000273295
Tripterygium wilfordii NC_052235.1 5 CH_twi_130 4 6 0.00000000557323
Tripterygium wilfordii NC_052233.1 5 CH_twi_298 3 5 0.000013328
Vitis vinifera chr10 5 CH_vvi_130 6 15 0.00000000000228939
Vitis vinifera chr18 5 CH_vvi_406 3 3 0.00000486007
Zea mays 2 5 CH_zma_360 5 73 0.000088174
Actinidia chinensis Lachesis_group26 6 CH_ach_21 5 6 0.000000000000504255
Arabidopsis lyrata scaffold_1 6 CH_aly_46 5 6 8.54233e-16
Avicennia marina ScioBoG_12795_HRSCAF_12848 6 CH_ama_54 3 3 0.000000624499
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 6 CH_amhyb_47 6 22 0.000000000130757
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_252 6 33 0.00000000000297903
Arabidopsis thaliana Chr1 6 CH_ath_52 5 14 0.0000000000000101148
Brassica carinata ChrC07 6 CH_bca_175 5 8 0.00000000000576572
Brassica carinata ChrB03 6 CH_bca_66 6 7 1.61838e-16
Brassica carinata ChrC05 6 CH_bca_997 3 4 0.00000712713
Brassica napus A06 6 CH_bna_268 4 6 0.000000000880436
Brassica napus C08 6 CH_bna_791 3 7 0.00000843142
Brassica oleracea C8 6 CH_bol_80 5 12 0.00000000000170776
Brassica rapa A06 6 CH_bra_174 3 3 0.000000232236
Brassica rapa A08 6 CH_bra_240 3 5 0.00000232181
Beta vulgaris Chr6_EL10_PGA_scaffold0 6 CH_bvu_187 4 5 0.000000174167
Beta vulgaris Chr3_EL10_PGA_scaffold7 6 CH_bvu_68 8 38 0.00000000000124479
Camellia sinensis var. sinensis Chr4 6 CH_camsi_879 4 27 0.0000301509
Cannabis sativa NC_044378.1 6 CH_cansat_141 4 5 0.00000000303605
Cannabis sativa NC_044378.1 6 CH_cansat_217 4 11 0.000000200056
Cannabis sativa NC_044371.1 6 CH_cansat_273 3 3 0.00000184982
Capsicum annuum PGAv.1.6.scaffold203 6 CH_can_435 3 7 0.00000716217
Cardamine hirsuta Chr1 6 CH_chi_299 3 3 0.000000401335
Carya illinoinensis Chr05 6 CH_cil_93 8 16 5.46844e-16
Carica papaya supercontig_64 6 CH_cpa_289 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_42 10 18 5.86722e-21
Chenopodium quinoa C_Quinoa_Scaffold_2370 6 CH_cqu_54 8 9 1.14337e-18
Chenopodium quinoa C_Quinoa_Scaffold_2187 6 CH_cqu_680 3 3 0.0000744257
Capsella rubella scaffold_1 6 CH_cru_84 5 7 0.0000000000000945251
Davidia involucrata GWHABJS00000011 6 CH_din_20 11 19 2.91235e-24
Davidia involucrata GWHABJS00000002 6 CH_din_6 14 25 9.63323e-32
Davidia involucrata GWHABJS00000001 6 CH_din_619 3 4 0.000212789
Durio zibethinus NW_019167949.1 6 CH_dzi_325 3 6 0.0000141709
Durio zibethinus NW_019167937.1 6 CH_dzi_67 6 24 0.000000000000597131
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_126 5 6 0.000000000155107
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_710 3 5 0.000346265
Eucalyptus grandis Chr06 6 CH_egr_701 4 7 0.000000101876
Erythranthe guttata scaffold_10 6 CH_egut_218 4 4 0.00000000693249
Eutrema salsugineum scaffold_5 6 CH_esa_165 3 3 0.0000000869853
Fragaria x ananassa Fvb3-2 6 CH_fan_141 6 17 0.000000000021821
Fragaria x ananassa Fvb3-3 6 CH_fan_544 4 12 0.00000370443
Fragaria x ananassa Fvb3-1 6 CH_fan_816 4 25 0.0000941757
Fragaria vesca Fvb7 6 CH_fve_455 3 3 0.00000593457
Gossypium hirsutum A05 6 CH_ghi_214 5 5 0.000000000000904911
Gossypium hirsutum D05 6 CH_ghi_357 4 4 0.00000000233714
Gossypium hirsutum D02 6 CH_ghi_44 11 15 1.89621e-30
Gossypium hirsutum A02 6 CH_ghi_450 4 7 0.0000000817205
Gossypium raimondii Chr09 6 CH_gra_182 4 4 0.00000000110024
Helianthus annuus HanXRQChr03 6 CH_han_271 5 8 0.00000000035256
Helianthus annuus HanXRQChr13 6 CH_han_423 4 5 0.0000000509628
Helianthus annuus HanXRQChr16 6 CH_han_846 3 4 0.0000639411
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_240 4 4 0.00000000197403
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_306 4 6 0.0000000295895
Lactuca sativa Lsat_1_v8_lg_9 6 CH_lsa_392 4 10 0.000000413666
Malus domestica Chr05 6 CH_mdo_331 4 8 0.00000000566566
Malus domestica Chr10 6 CH_mdo_622 4 30 0.00000221127
Manihot esculenta Chromosome02 6 CH_mes_42 9 11 3.01861e-26
Medicago truncatula chr3 6 CH_mtr_148 6 7 3.42316e-16
Nicotiana tabacum Nitab4.5_0000261 6 CH_nta_82 4 13 0.0000000990334
Olea europaea chr11 6 CH_oeu_262 3 3 0.000019212
Petunia axillaris Peaxi162Scf01132 6 CH_pax_147 4 5 0.00000000950481
Punica granatum NC_045134.1 6 CH_pgr_168 4 10 0.00000000399052
Prunus persica Pp04 6 CH_ppe_15 13 28 4.02147e-33
Papaver somniferum NC_039363.1 6 CH_pso_1117 3 4 0.000382158
Papaver somniferum NC_039366.1 6 CH_pso_923 3 3 0.0000956125
Papaver somniferum NC_039363.1 6 CH_pso_924 3 3 0.0000956125
Populus trichocarpa Chr02 6 CH_ptr_516 3 5 0.0000408643
Populus trichocarpa Chr04 6 CH_ptr_60 9 26 2.67279e-20
Quercus lobata 4 6 CH_qlo_713 5 15 0.0000000226798
Salvia bowleyana GWHASIU00000005 6 CH_sbo_79 8 16 1.76532e-18
Salix brachista GWHAAZH00000004 6 CH_sbr_187 5 12 0.00000000396673
Salix brachista GWHAAZH00000002 6 CH_sbr_86 6 8 0.0000000000000841867
Sequoiadendron giganteum chr3 6 CH_sgi_647 5 5 0.0000000000805573
Solanum lycopersicum SL4.0ch09 6 CH_sly_173 4 4 0.000000000127398
Solanum pennellii Spenn-ch09 6 CH_spe_311 3 3 0.000000249282
Solanum tuberosum ST4.03ch09 6 CH_stu_181 5 8 0.0000000000247979
Solanum tuberosum ST4.03ch10 6 CH_stu_190 5 9 0.0000000000557784
Solanum tuberosum ST4.03ch09 6 CH_stu_270 4 5 0.00000000617549
Trochodendron aralioides group5 6 CH_tar_119 5 8 0.0000000000633873
Theobroma cacao Chromosome_8 6 CH_tca_112 5 8 0.000000000000253745
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_106 4 4 0.000000000273295
Tripterygium wilfordii NC_052235.1 6 CH_twi_130 4 6 0.00000000557323
Tripterygium wilfordii NC_052233.1 6 CH_twi_298 3 5 0.000013328
Vitis vinifera chr10 6 CH_vvi_130 6 15 0.00000000000228939
Vitis vinifera chr18 6 CH_vvi_406 3 3 0.00000486007
Zea mays 2 6 CH_zma_360 5 73 0.000088174

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001