Functional clusters
Information
- Type InterPro
- Description Zinc finger, GATA-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_303 | 3 | 3 | 0.0000433686 |
| Brassica carinata | ChrC07 | 5 | CH_bca_231 | 5 | 5 | 0.000000000130446 |
| Chlamydomonas reinhardtii | chromosome_9 | 5 | CH_cre_86 | 4 | 16 | 0.0000308644 |
| Malus domestica | Chr16 | 5 | CH_mdo_341 | 4 | 4 | 0.00000000758725 |
| Medicago truncatula | chr8 | 5 | CH_mtr_1028 | 3 | 4 | 0.000116205 |
| Medicago truncatula | chr7 | 5 | CH_mtr_707 | 4 | 8 | 0.00000162616 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_1138 | 3 | 7 | 0.000431434 |
| Sechium edule | LG06 | 5 | CH_sed_338 | 3 | 3 | 0.0000754316 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1435 | 3 | 3 | 0.0000072051 |
| Zea mays | 4 | 5 | CH_zma_282 | 4 | 12 | 0.0000130384 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_303 | 3 | 3 | 0.0000433686 |
| Brassica carinata | ChrC07 | 6 | CH_bca_231 | 5 | 5 | 0.000000000130446 |
| Chlamydomonas reinhardtii | chromosome_9 | 6 | CH_cre_86 | 4 | 16 | 0.0000308644 |
| Malus domestica | Chr16 | 6 | CH_mdo_341 | 4 | 4 | 0.00000000758725 |
| Medicago truncatula | chr8 | 6 | CH_mtr_1028 | 3 | 4 | 0.000116205 |
| Medicago truncatula | chr7 | 6 | CH_mtr_707 | 4 | 8 | 0.00000162616 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_1138 | 3 | 7 | 0.000431434 |
| Sechium edule | LG06 | 6 | CH_sed_338 | 3 | 3 | 0.0000754316 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1435 | 3 | 3 | 0.0000072051 |
| Zea mays | 4 | 6 | CH_zma_282 | 4 | 12 | 0.0000130384 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |