Functional clusters

Information

  • Type InterPro
  • Description Napin/ Bra allergen

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 5 CH_aar_329 2 2 0.000273698
Arabidopsis lyrata scaffold_7 5 CH_aly_194 3 3 0.0000000261404
Arabidopsis thaliana Chr4 5 CH_ath_71 4 4 0.000000000000352734
Brassica napus A01 5 CH_bna_122 5 7 0.000000000000160161
Brassica napus C01 5 CH_bna_516 3 3 0.000000421715
Brassica oleracea C1 5 CH_bol_116 4 6 0.000000000197981
Brassica rapa A01 5 CH_bra_24 5 5 0.0000000000000032106
Citrus clementina scaffold_1 5 CH_ccl_690 2 4 0.000492146
Carpinus fangiana Cfa08 5 CH_cfa_399 2 2 0.0000757346
Cardamine hirsuta Chr7 5 CH_chi_594 2 2 0.000207361
Carica papaya supercontig_10 5 CH_cpa_34 5 13 0.0000000000047284
Capsella rubella scaffold_7 5 CH_cru_107 4 4 0.00000000000586363
Daucus carota DCARv2_Chr6 5 CH_dca_403 2 2 0.0000637775
Erythranthe guttata scaffold_10 5 CH_egut_170 4 7 0.000000000202664
Manihot esculenta Chromosome03 5 CH_mes_493 2 2 0.0000610631
Petunia axillaris Peaxi162Scf00714 5 CH_pax_401 2 2 0.0000703556
Striga asiatica scaffold13 5 CH_sas_135 2 2 0.0000625371
Sapria himalayana scaffold60_3140063 5 CH_shi_77 4 12 0.00000000138771
Solanum lycopersicum SL4.0ch08 5 CH_sly_695 2 2 0.000176082
Solanum pennellii Spenn-ch08 5 CH_spe_534 2 2 0.000044479
Tarenaya hassleriana NW_010966021.1 5 CH_tha_137 3 5 0.0000014633
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_430 2 2 0.0000929238
Aethionema arabicum LG-5 6 CH_aar_329 2 2 0.000273698
Arabidopsis lyrata scaffold_7 6 CH_aly_194 3 3 0.0000000261404
Arabidopsis thaliana Chr4 6 CH_ath_71 4 4 0.000000000000352734
Brassica napus A01 6 CH_bna_122 5 7 0.000000000000160161
Brassica napus C01 6 CH_bna_516 3 3 0.000000421715
Brassica oleracea C1 6 CH_bol_116 4 6 0.000000000197981
Brassica rapa A01 6 CH_bra_24 5 5 0.0000000000000032106
Citrus clementina scaffold_1 6 CH_ccl_690 2 4 0.000492146
Carpinus fangiana Cfa08 6 CH_cfa_399 2 2 0.0000757346
Cardamine hirsuta Chr7 6 CH_chi_594 2 2 0.000207361
Carica papaya supercontig_10 6 CH_cpa_34 5 13 0.0000000000047284
Capsella rubella scaffold_7 6 CH_cru_107 4 4 0.00000000000586363
Daucus carota DCARv2_Chr6 6 CH_dca_403 2 2 0.0000637775
Erythranthe guttata scaffold_10 6 CH_egut_170 4 7 0.000000000202664
Manihot esculenta Chromosome03 6 CH_mes_493 2 2 0.0000610631
Petunia axillaris Peaxi162Scf00714 6 CH_pax_401 2 2 0.0000703556
Striga asiatica scaffold13 6 CH_sas_135 2 2 0.0000625371
Sapria himalayana scaffold60_3140063 6 CH_shi_77 4 12 0.00000000138771
Solanum lycopersicum SL4.0ch08 6 CH_sly_695 2 2 0.000176082
Solanum pennellii Spenn-ch08 6 CH_spe_534 2 2 0.000044479
Tarenaya hassleriana NW_010966021.1 6 CH_tha_137 3 5 0.0000014633
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_430 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001