Functional clusters

Information

  • Type InterPro
  • Description HECT domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_327 6 23 0.000000000126128
Brassica carinata Contig1189 5 CH_bca_883 3 3 0.00000278287
Brassica napus A09 5 CH_bna_857 3 6 0.0000182972
Brassica oleracea C9 5 CH_bol_179 4 7 0.00000000667033
Brassica rapa A09 5 CH_bra_300 3 6 0.0000158055
Daucus carota DCARv2_Chr9 5 CH_dca_80 5 6 0.00000000000637797
Erigeron canadensis Conyza_canadensis_scaffold:9 5 CH_eca_343 3 3 0.0000010994
Manihot esculenta Chromosome07 5 CH_mes_484 3 4 0.0000581371
Medicago truncatula chr2 5 CH_mtr_388 4 5 0.00000000141989
Sequoiadendron giganteum chr11 5 CH_sgi_687 4 4 0.000000000347199
Solanum tuberosum ST4.03ch09 5 CH_stu_445 3 3 0.00000267867
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_327 6 23 0.000000000126128
Brassica carinata Contig1189 6 CH_bca_883 3 3 0.00000278287
Brassica napus A09 6 CH_bna_857 3 6 0.0000182972
Brassica oleracea C9 6 CH_bol_179 4 7 0.00000000667033
Brassica rapa A09 6 CH_bra_300 3 6 0.0000158055
Daucus carota DCARv2_Chr9 6 CH_dca_80 5 6 0.00000000000637797
Erigeron canadensis Conyza_canadensis_scaffold:9 6 CH_eca_343 3 3 0.0000010994
Manihot esculenta Chromosome07 6 CH_mes_484 3 4 0.0000581371
Medicago truncatula chr2 6 CH_mtr_388 4 5 0.00000000141989
Sequoiadendron giganteum chr11 6 CH_sgi_687 4 4 0.000000000347199
Solanum tuberosum ST4.03ch09 6 CH_stu_445 3 3 0.00000267867

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001