Functional clusters

Information

  • Type InterPro
  • Description Ribosomal protein S12e

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB02 5 CH_bca_1102 3 8 0.0000174555
Chenopodium quinoa C_Quinoa_Scaffold_1000 5 CH_cqu_825 2 2 0.000284293
Fragaria vesca Fvb1 5 CH_fve_754 2 3 0.000530165
Hydrangea macrophylla Hma1.2p1_0222F.1 5 CH_hma_531 2 2 0.000333259
Lotus japonicus chr3 5 CH_lja_215 3 5 0.000000306774
Malus domestica Chr02 5 CH_mdo_1086 2 2 0.000227527
Malus domestica Chr15 5 CH_mdo_1087 2 2 0.000227527
Olea europaea chr12 5 CH_oeu_430 2 2 0.000160137
Simmondsia chinensis GWHAASQ00000010 5 CH_sci_153 3 5 0.00000043491
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_567 2 2 0.000278772
Brassica carinata ChrB02 6 CH_bca_1102 3 8 0.0000174555
Chenopodium quinoa C_Quinoa_Scaffold_1000 6 CH_cqu_825 2 2 0.000284293
Fragaria vesca Fvb1 6 CH_fve_754 2 3 0.000530165
Hydrangea macrophylla Hma1.2p1_0222F.1 6 CH_hma_531 2 2 0.000333259
Lotus japonicus chr3 6 CH_lja_215 3 5 0.000000306774
Malus domestica Chr02 6 CH_mdo_1086 2 2 0.000227527
Malus domestica Chr15 6 CH_mdo_1087 2 2 0.000227527
Olea europaea chr12 6 CH_oeu_430 2 2 0.000160137
Simmondsia chinensis GWHAASQ00000010 6 CH_sci_153 3 5 0.00000043491
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_567 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001