Functional clusters

Information

  • Type InterPro
  • Description Chorismate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102831_HRSCAF_103044 5 CH_ama_158 2 2 0.000258665
Capsicum annuum PGAv.1.6.scaffold186 5 CH_can_549 2 2 0.0000826105
Coffea canephora chr9 5 CH_ccan_293 2 4 0.0000127767
Erythranthe guttata scaffold_6 5 CH_egut_486 2 2 0.0000728147
Gossypium hirsutum A10 5 CH_ghi_1256 2 2 0.000747644
Gossypium hirsutum D05 5 CH_ghi_1257 2 2 0.000747644
Gossypium hirsutum D10 5 CH_ghi_440 3 3 0.0000000598905
Glycine max Gm14 5 CH_gma_717 2 2 0.000227734
Gossypium raimondii Chr11 5 CH_gra_498 2 2 0.000160832
Malus domestica Chr01 5 CH_mdo_1346 2 4 0.000682538
Sapria himalayana scaffold12_13443846 5 CH_shi_375 2 3 0.000171536
Avicennia marina ScioBoG_102831_HRSCAF_103044 6 CH_ama_158 2 2 0.000258665
Capsicum annuum PGAv.1.6.scaffold186 6 CH_can_549 2 2 0.0000826105
Coffea canephora chr9 6 CH_ccan_293 2 4 0.0000127767
Erythranthe guttata scaffold_6 6 CH_egut_486 2 2 0.0000728147
Fragaria x ananassa Fvb4-3 6 CH_fan_1155 2 2 0.00066613
Gossypium hirsutum A10 6 CH_ghi_1256 2 2 0.000747644
Gossypium hirsutum D05 6 CH_ghi_1257 2 2 0.000747644
Gossypium hirsutum D10 6 CH_ghi_440 3 3 0.0000000598905
Glycine max Gm14 6 CH_gma_717 2 2 0.000227734
Gossypium raimondii Chr11 6 CH_gra_498 2 2 0.000160832
Malus domestica Chr01 6 CH_mdo_1346 2 4 0.000682538
Sapria himalayana scaffold12_13443846 6 CH_shi_375 2 3 0.000171536

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001