Functional clusters
Information
- Type InterPro
- Description PB1 domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 5 | CH_amhyb_283 | 3 | 4 | 0.00021067 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 5 | CH_bvu_215 | 4 | 6 | 0.000000522065 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_1371 | 5 | 47 | 0.000466985 |
| Carya illinoinensis | Chr11 | 5 | CH_cil_203 | 6 | 13 | 0.0000000000816535 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_789 | 3 | 4 | 0.000527152 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_1049 | 3 | 3 | 0.0003622 |
| Lotus japonicus | Contig00408 | 5 | CH_lja_174 | 4 | 4 | 0.0000000902336 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_38 | 13 | 67 | 8.96636e-22 |
| Malus domestica | Chr06 | 5 | CH_mdo_1052 | 3 | 4 | 0.000168997 |
| Marchantia polymorpha | scaffold_39 | 5 | CH_mpo_97 | 3 | 3 | 0.00000301905 |
| Medicago truncatula | chr5 | 5 | CH_mtr_202 | 7 | 13 | 0.000000000000055598 |
| Medicago truncatula | chr4 | 5 | CH_mtr_81 | 9 | 11 | 1.29942e-21 |
| Olea europaea | chr13 | 5 | CH_oeu_110 | 6 | 24 | 0.0000000158253 |
| Prunus persica | Pp05 | 5 | CH_ppe_723 | 3 | 5 | 0.00033836 |
| Papaver somniferum | NC_039368.1 | 5 | CH_pso_1111 | 3 | 6 | 0.000356252 |
| Quercus lobata | 10 | 5 | CH_qlo_644 | 6 | 28 | 0.00000000711833 |
| Rhododendron simsii | chr05 | 5 | CH_rsi_844 | 4 | 15 | 0.000293796 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_312 | 7 | 9 | 3.16012e-16 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 5 | CH_tpr_234 | 4 | 5 | 0.000000266024 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_348 | 4 | 8 | 0.0000110736 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 6 | CH_amhyb_283 | 3 | 4 | 0.00021067 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 6 | CH_bvu_215 | 4 | 6 | 0.000000522065 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_1371 | 5 | 47 | 0.000466985 |
| Carya illinoinensis | Chr11 | 6 | CH_cil_203 | 6 | 13 | 0.0000000000816535 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_789 | 3 | 4 | 0.000527152 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_1049 | 3 | 3 | 0.0003622 |
| Lotus japonicus | Contig00408 | 6 | CH_lja_174 | 4 | 4 | 0.0000000902336 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_38 | 13 | 67 | 8.96636e-22 |
| Malus domestica | Chr06 | 6 | CH_mdo_1052 | 3 | 4 | 0.000168997 |
| Marchantia polymorpha | scaffold_39 | 6 | CH_mpo_97 | 3 | 3 | 0.00000301905 |
| Medicago truncatula | chr5 | 6 | CH_mtr_202 | 7 | 13 | 0.000000000000055598 |
| Medicago truncatula | chr4 | 6 | CH_mtr_81 | 9 | 11 | 1.29942e-21 |
| Olea europaea | chr13 | 6 | CH_oeu_110 | 6 | 24 | 0.0000000158253 |
| Prunus persica | Pp05 | 6 | CH_ppe_723 | 3 | 5 | 0.00033836 |
| Papaver somniferum | NC_039368.1 | 6 | CH_pso_1111 | 3 | 6 | 0.000356252 |
| Quercus lobata | 10 | 6 | CH_qlo_644 | 6 | 28 | 0.00000000711833 |
| Rhododendron simsii | chr05 | 6 | CH_rsi_844 | 4 | 15 | 0.000293796 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_312 | 7 | 9 | 3.16012e-16 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 6 | CH_tpr_234 | 4 | 5 | 0.000000266024 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_348 | 4 | 8 | 0.0000110736 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |