Functional clusters

Information

  • Type InterPro
  • Description Protein translocase subunit SecA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold100 5 CH_can_547 2 2 0.0000826105
Coffea canephora chr10 5 CH_ccan_145 3 13 0.0000000239418
Ceratophyllum demersum 6 5 CH_cde_390 2 2 0.000473878
Gossypium hirsutum A12 5 CH_ghi_1029 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_0014F.1 5 CH_hma_680 2 3 0.000999685
Lonicera japonica GWHAAZE00000007 5 CH_lonja_360 4 11 0.00000000743771
Malus domestica Chr08 5 CH_mdo_1085 2 2 0.000227527
Manihot esculenta Chromosome02 5 CH_mes_572 2 2 0.000183189
Phaseolus vulgaris Chr07 5 CH_pvu_529 2 2 0.000220418
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1313 2 2 0.000398653
Simmondsia chinensis GWHAASQ00000017 5 CH_sci_378 2 2 0.000255428
Sequoiadendron giganteum chr7 5 CH_sgi_1043 3 3 0.0000000711967
Sequoiadendron giganteum chr2 5 CH_sgi_1044 3 3 0.0000000711967
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_680 2 2 0.000557543
Vigna mungo CM024071.1 5 CH_vmu_506 2 2 0.000387685
Vanilla planifolia CM028152.1 5 CH_vpl_527 2 2 0.000221664
Capsicum annuum PGAv.1.6.scaffold100 6 CH_can_547 2 2 0.0000826105
Coffea canephora chr10 6 CH_ccan_145 3 13 0.0000000239418
Ceratophyllum demersum 6 6 CH_cde_390 2 2 0.000473878
Gossypium hirsutum A12 6 CH_ghi_1029 2 2 0.000267016
Hydrangea macrophylla Hma1.2p1_0014F.1 6 CH_hma_680 2 3 0.000999685
Lonicera japonica GWHAAZE00000007 6 CH_lonja_360 4 11 0.00000000743771
Malus domestica Chr08 6 CH_mdo_1085 2 2 0.000227527
Manihot esculenta Chromosome02 6 CH_mes_572 2 2 0.000183189
Phaseolus vulgaris Chr07 6 CH_pvu_529 2 2 0.000220418
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1313 2 2 0.000398653
Simmondsia chinensis GWHAASQ00000017 6 CH_sci_378 2 2 0.000255428
Sequoiadendron giganteum chr7 6 CH_sgi_1043 3 3 0.0000000711967
Sequoiadendron giganteum chr2 6 CH_sgi_1044 3 3 0.0000000711967
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_680 2 2 0.000557543
Vigna mungo CM024071.1 6 CH_vmu_506 2 2 0.000387685
Vanilla planifolia CM028152.1 6 CH_vpl_527 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001