Functional clusters
Information
- Type InterPro
- Description Oleosin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-3 | 5 | CH_aar_227 | 3 | 4 | 0.0000109835 |
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_42 | 7 | 11 | 6.83224e-17 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_22 | 8 | 13 | 2.80903e-22 |
| Brassica carinata | ChrC04 | 5 | CH_bca_1055 | 3 | 3 | 0.0000104049 |
| Brassica carinata | ChrB01 | 5 | CH_bca_363 | 4 | 4 | 0.00000000478212 |
| Brassica carinata | ChrC06 | 5 | CH_bca_86 | 9 | 68 | 0.00000000000000328456 |
| Brassica napus | A03 | 5 | CH_bna_148 | 5 | 5 | 0.00000000000281569 |
| Brassica napus | C09 | 5 | CH_bna_149 | 5 | 5 | 0.00000000000281569 |
| Brassica napus | A10 | 5 | CH_bna_195 | 5 | 7 | 0.0000000000590835 |
| Brassica napus | C02 | 5 | CH_bna_446 | 4 | 6 | 0.0000000909444 |
| Brassica napus | C03 | 5 | CH_bna_978 | 3 | 4 | 0.0000512569 |
| Brassica oleracea | C2 | 5 | CH_bol_220 | 4 | 6 | 0.0000000373 |
| Brassica oleracea | C3 | 5 | CH_bol_493 | 3 | 4 | 0.0000234158 |
| Brassica oleracea | C9 | 5 | CH_bol_75 | 5 | 5 | 0.00000000000101674 |
| Brassica rapa | A02 | 5 | CH_bra_115 | 4 | 4 | 0.00000000563839 |
| Brassica rapa | A03 | 5 | CH_bra_333 | 3 | 4 | 0.0000403912 |
| Brassica rapa | A10 | 5 | CH_bra_50 | 5 | 5 | 0.00000000000302599 |
| Chara braunii | BFEA01000292 | 5 | CH_cbr_309 | 3 | 14 | 0.000464806 |
| Cardamine hirsuta | Chr6 | 5 | CH_chi_97 | 5 | 5 | 0.000000000000747928 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_47 | 7 | 9 | 8.42193e-18 |
| Eutrema salsugineum | scaffold_2 | 5 | CH_esa_24 | 7 | 7 | 2.98805e-19 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_365 | 3 | 3 | 0.000000437284 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_578 | 3 | 3 | 0.000000133499 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_733 | 2 | 2 | 0.00068247 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_386 | 5 | 8 | 0.000000000000049671 |
| Schrenkiella parvula | ch6-6 | 5 | CH_spa_18 | 6 | 6 | 5.45366e-16 |
| Aethionema arabicum | LG-3 | 6 | CH_aar_227 | 3 | 4 | 0.0000109835 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_42 | 7 | 11 | 6.83224e-17 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_22 | 8 | 13 | 2.80903e-22 |
| Brassica carinata | ChrC04 | 6 | CH_bca_1055 | 3 | 3 | 0.0000104049 |
| Brassica carinata | ChrB01 | 6 | CH_bca_363 | 4 | 4 | 0.00000000478212 |
| Brassica carinata | ChrC06 | 6 | CH_bca_86 | 9 | 68 | 0.00000000000000328456 |
| Brassica napus | A03 | 6 | CH_bna_148 | 5 | 5 | 0.00000000000281569 |
| Brassica napus | C09 | 6 | CH_bna_149 | 5 | 5 | 0.00000000000281569 |
| Brassica napus | A10 | 6 | CH_bna_195 | 5 | 7 | 0.0000000000590835 |
| Brassica napus | C02 | 6 | CH_bna_446 | 4 | 6 | 0.0000000909444 |
| Brassica napus | C03 | 6 | CH_bna_978 | 3 | 4 | 0.0000512569 |
| Brassica oleracea | C2 | 6 | CH_bol_220 | 4 | 6 | 0.0000000373 |
| Brassica oleracea | C3 | 6 | CH_bol_493 | 3 | 4 | 0.0000234158 |
| Brassica oleracea | C9 | 6 | CH_bol_75 | 5 | 5 | 0.00000000000101674 |
| Brassica rapa | A02 | 6 | CH_bra_115 | 4 | 4 | 0.00000000563839 |
| Brassica rapa | A03 | 6 | CH_bra_333 | 3 | 4 | 0.0000403912 |
| Brassica rapa | A10 | 6 | CH_bra_50 | 5 | 5 | 0.00000000000302599 |
| Chara braunii | BFEA01000292 | 6 | CH_cbr_309 | 3 | 14 | 0.000464806 |
| Cardamine hirsuta | Chr6 | 6 | CH_chi_97 | 5 | 5 | 0.000000000000747928 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_47 | 7 | 9 | 8.42193e-18 |
| Eutrema salsugineum | scaffold_2 | 6 | CH_esa_24 | 7 | 7 | 2.98805e-19 |
| Fragaria x ananassa | Fvb2-3 | 6 | CH_fan_524 | 3 | 4 | 0.00000316321 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_365 | 3 | 3 | 0.000000437284 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_578 | 3 | 3 | 0.000000133499 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_733 | 2 | 2 | 0.00068247 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_386 | 5 | 8 | 0.000000000000049671 |
| Schrenkiella parvula | ch6-6 | 6 | CH_spa_18 | 6 | 6 | 5.45366e-16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |