Functional clusters
Information
- Type InterPro
- Description ER lumen protein retaining receptor
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_8 | 5 | CH_amhyb_59 | 4 | 4 | 0.000000000590528 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_66 | 5 | 6 | 0.000000000000976793 |
| Corylus avellana | 3 | 5 | CH_cav_347 | 3 | 4 | 0.00000423146 |
| Coffea canephora | chr1 | 5 | CH_ccan_233 | 3 | 28 | 0.00000159137 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 5 | CH_cqu_214 | 4 | 4 | 0.000000000759579 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 5 | CH_cqu_467 | 3 | 3 | 0.00000229002 |
| Lupinus albus | Lalb_Chr12 | 5 | CH_lal_18 | 8 | 9 | 1.52476e-21 |
| Lupinus albus | Lalb_Chr07 | 5 | CH_lal_41 | 6 | 6 | 9.04605e-16 |
| Lotus japonicus | chr3 | 5 | CH_lja_271 | 3 | 4 | 0.00000171786 |
| Medicago truncatula | chr8 | 5 | CH_mtr_173 | 5 | 5 | 0.00000000000000269324 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_223 | 3 | 3 | 0.000000081633 |
| Salix brachista | GWHAAZH00000017 | 5 | CH_sbr_714 | 3 | 19 | 0.000948972 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_2409 | 2 | 2 | 0.000487151 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_8 | 6 | CH_amhyb_59 | 4 | 4 | 0.000000000590528 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_66 | 5 | 6 | 0.000000000000976793 |
| Corylus avellana | 3 | 6 | CH_cav_347 | 3 | 4 | 0.00000423146 |
| Coffea canephora | chr1 | 6 | CH_ccan_233 | 3 | 28 | 0.00000159137 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 6 | CH_cqu_214 | 4 | 4 | 0.000000000759579 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 6 | CH_cqu_467 | 3 | 3 | 0.00000229002 |
| Lupinus albus | Lalb_Chr12 | 6 | CH_lal_18 | 8 | 9 | 1.52476e-21 |
| Lupinus albus | Lalb_Chr07 | 6 | CH_lal_41 | 6 | 6 | 9.04605e-16 |
| Lotus japonicus | chr3 | 6 | CH_lja_271 | 3 | 4 | 0.00000171786 |
| Medicago truncatula | chr8 | 6 | CH_mtr_173 | 5 | 5 | 0.00000000000000269324 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_223 | 3 | 3 | 0.000000081633 |
| Salix brachista | GWHAAZH00000017 | 6 | CH_sbr_714 | 3 | 19 | 0.000948972 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_2409 | 2 | 2 | 0.000487151 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |