Functional clusters

Information

  • Type InterPro
  • Description ATP synthase, F1 complex, gamma subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_322 3 4 0.000000298174
Brassica carinata ChrC01 5 CH_bca_1965 3 14 0.000647305
Brassica napus C03 5 CH_bna_1204 3 13 0.000261378
Brassica oleracea C3 5 CH_bol_576 3 12 0.0000774776
Cicer arietinum L. Ca_LG1_v3 5 CH_car_343 2 2 0.000466981
Coffea canephora chr9 5 CH_ccan_649 2 10 0.000536609
Carpinus fangiana Cfa01 5 CH_cfa_602 2 2 0.000757346
Carya illinoinensis Chr10 5 CH_cil_415 3 4 0.00000129072
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_843 2 3 0.000807658
Eucalyptus grandis Chr05 5 CH_egr_1270 2 2 0.000351165
Fragaria vesca Fvb3 5 CH_fve_701 2 2 0.000353461
Glycine max Gm13 5 CH_gma_934 2 2 0.00079707
Glycine max Gm15 5 CH_gma_935 2 2 0.00079707
Helianthus annuus HanXRQChr09 5 CH_han_706 4 50 0.0000130802
Lupinus albus Lalb_Chr20 5 CH_lal_753 2 2 0.000787236
Malus domestica Chr05 5 CH_mdo_263 4 6 0.000000000515236
Medicago truncatula chr2 5 CH_mtr_1155 2 2 0.000246518
Prunus persica Pp04 5 CH_ppe_750 2 2 0.000447577
Pisum sativum chr3LG5 5 CH_psa_670 2 2 0.000521635
Populus trichocarpa Chr04 5 CH_ptr_339 3 3 0.00000028064
Phaseolus vulgaris Chr06 5 CH_pvu_590 2 2 0.000440836
Quercus lobata 5 5 CH_qlo_965 3 4 0.00000134328
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_115 7 20 8.81768e-19
Salix brachista GWHAAZH00000011 5 CH_sbr_434 3 12 0.0000458117
Sapria himalayana scaffold3_21451142 5 CH_shi_129 3 3 0.0000000490454
Trifolium pratense Tp57577_TGAC_v2_LG7 5 CH_tpr_749 2 2 0.000756974
Vigna mungo CM024075.1 5 CH_vmu_590 2 2 0.000646141
Vanilla planifolia CM028163.1 5 CH_vpl_210 3 6 0.00000163744
Acer truncatum chr10 6 CH_acertr_322 3 4 0.000000298174
Brassica carinata ChrC01 6 CH_bca_1965 3 14 0.000647305
Brassica napus C03 6 CH_bna_1204 3 13 0.000261378
Brassica oleracea C3 6 CH_bol_576 3 12 0.0000774776
Cicer arietinum L. Ca_LG1_v3 6 CH_car_343 2 2 0.000466981
Coffea canephora chr9 6 CH_ccan_649 2 10 0.000536609
Carpinus fangiana Cfa01 6 CH_cfa_602 2 2 0.000757346
Carya illinoinensis Chr10 6 CH_cil_415 3 4 0.00000129072
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_843 2 3 0.000807658
Eucalyptus grandis Chr05 6 CH_egr_1270 2 2 0.000351165
Fragaria x ananassa Fvb3-1 6 CH_fan_1153 2 2 0.00066613
Fragaria vesca Fvb3 6 CH_fve_701 2 2 0.000353461
Glycine max Gm13 6 CH_gma_934 2 2 0.00079707
Glycine max Gm15 6 CH_gma_935 2 2 0.00079707
Helianthus annuus HanXRQChr09 6 CH_han_706 4 50 0.0000130802
Lupinus albus Lalb_Chr20 6 CH_lal_753 2 2 0.000787236
Malus domestica Chr05 6 CH_mdo_263 4 6 0.000000000515236
Medicago truncatula chr2 6 CH_mtr_1155 2 2 0.000246518
Prunus persica Pp04 6 CH_ppe_750 2 2 0.000447577
Pisum sativum chr3LG5 6 CH_psa_670 2 2 0.000521635
Populus trichocarpa Chr04 6 CH_ptr_339 3 3 0.00000028064
Phaseolus vulgaris Chr06 6 CH_pvu_590 2 2 0.000440836
Quercus lobata 5 6 CH_qlo_965 3 4 0.00000134328
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_115 7 20 8.81768e-19
Salix brachista GWHAAZH00000011 6 CH_sbr_434 3 12 0.0000458117
Sapria himalayana scaffold3_21451142 6 CH_shi_129 3 3 0.0000000490454
Trifolium pratense Tp57577_TGAC_v2_LG7 6 CH_tpr_749 2 2 0.000756974
Vigna mungo CM024075.1 6 CH_vmu_590 2 2 0.000646141
Vanilla planifolia CM028163.1 6 CH_vpl_210 3 6 0.00000163744

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001