Functional clusters

Information

  • Type InterPro
  • Description Amidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00017 5 CH_atr_627 2 2 0.000794407
Brassica rapa A02 5 CH_bra_560 2 2 0.00064397
Camellia sinensis var. sinensis Chr15 5 CH_camsi_1537 2 2 0.000962949
Capsicum annuum PGAv.1.6.scaffold504 5 CH_can_104 5 5 0.0000000000000195658
Citrus clementina scaffold_5 5 CH_ccl_701 2 2 0.000492187
Eucalyptus grandis Chr09 5 CH_egr_707 3 3 0.000000102767
Hydrangea macrophylla Hma1.2p1_0908F.1 5 CH_hma_623 2 2 0.000666519
Lupinus albus Lalb_Chr12 5 CH_lal_752 2 2 0.000787236
Lotus japonicus chr1 5 CH_lja_350 3 8 0.0000240337
Manihot esculenta Chromosome14 5 CH_mes_674 2 2 0.000610631
Petunia axillaris Peaxi162Scf00310 5 CH_pax_247 3 3 0.000000623712
Punica granatum NC_045128.1 5 CH_pgr_605 2 2 0.000750356
Prunus persica Pp04 5 CH_ppe_833 2 2 0.000745962
Salix brachista GWHAAZH00000016 5 CH_sbr_648 2 2 0.00063014
Sequoiadendron giganteum chr1 5 CH_sgi_1245 3 3 0.000000783163
Sequoiadendron giganteum chr3 5 CH_sgi_664 4 4 0.000000000171692
Solanum lycopersicum SL4.0ch01 5 CH_sly_167 4 4 0.0000000000764385
Solanum pennellii Spenn-ch01 5 CH_spe_122 4 4 0.0000000000554416
Solanum tuberosum ST4.03ch01 5 CH_stu_188 4 4 0.0000000000508729
Selenicereus undatus Scaffold_33678 5 CH_sun_378 2 2 0.000726639
Vitis vinifera chr15 5 CH_vvi_301 3 3 0.000000303754
Zea mays 10 5 CH_zma_512 2 2 0.000766969
Amborella trichopoda AmTr_v1.0_scaffold00017 6 CH_atr_627 2 2 0.000794407
Brassica rapa A02 6 CH_bra_560 2 2 0.00064397
Camellia sinensis var. sinensis Chr15 6 CH_camsi_1537 2 2 0.000962949
Capsicum annuum PGAv.1.6.scaffold504 6 CH_can_104 5 5 0.0000000000000195658
Citrus clementina scaffold_5 6 CH_ccl_701 2 2 0.000492187
Eucalyptus grandis Chr09 6 CH_egr_707 3 3 0.000000102767
Hydrangea macrophylla Hma1.2p1_0908F.1 6 CH_hma_623 2 2 0.000666519
Lupinus albus Lalb_Chr12 6 CH_lal_752 2 2 0.000787236
Lotus japonicus chr1 6 CH_lja_350 3 8 0.0000240337
Manihot esculenta Chromosome14 6 CH_mes_674 2 2 0.000610631
Petunia axillaris Peaxi162Scf00310 6 CH_pax_247 3 3 0.000000623712
Punica granatum NC_045128.1 6 CH_pgr_605 2 2 0.000750356
Prunus persica Pp04 6 CH_ppe_833 2 2 0.000745962
Salix brachista GWHAAZH00000016 6 CH_sbr_648 2 2 0.00063014
Sequoiadendron giganteum chr1 6 CH_sgi_1245 3 3 0.000000783163
Sequoiadendron giganteum chr3 6 CH_sgi_664 4 4 0.000000000171692
Solanum lycopersicum SL4.0ch01 6 CH_sly_167 4 4 0.0000000000764385
Solanum pennellii Spenn-ch01 6 CH_spe_122 4 4 0.0000000000554416
Solanum tuberosum ST4.03ch01 6 CH_stu_188 4 4 0.0000000000508729
Selenicereus undatus Scaffold_33678 6 CH_sun_378 2 2 0.000726639
Vitis vinifera chr15 6 CH_vvi_301 3 3 0.000000303754
Zea mays 10 6 CH_zma_512 2 2 0.000766969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001