Functional clusters

Information

  • Type InterPro
  • Description Gamma-glutamyltranspeptidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 5 CH_aag_317 2 4 0.000481502
Arabidopsis thaliana Chr4 5 CH_ath_581 2 3 0.000515668
Amborella trichopoda AmTr_v1.0_scaffold00002 5 CH_atr_41 7 7 6.30266e-19
Amborella trichopoda AmTr_v1.0_scaffold00056 5 CH_atr_76 5 5 0.00000000000255987
Brassica carinata Contig281 5 CH_bca_1383 3 15 0.0000890984
Brassica napus C07 5 CH_bna_265 4 5 0.000000000849331
Brassica napus C07 5 CH_bna_573 3 3 0.000000915266
Brassica oleracea C7 5 CH_bol_123 4 5 0.0000000003745
Brassica rapa A09 5 CH_bra_215 3 4 0.00000132688
Capsicum annuum PGAv.1.6.scaffold786 5 CH_can_546 2 2 0.0000826105
Citrus clementina scaffold_1 5 CH_ccl_633 2 2 0.000246093
Cardamine hirsuta Chr7 5 CH_chi_125 4 4 0.000000000014862
Carica papaya supercontig_78 5 CH_cpa_443 2 3 0.000285185
Capsella rubella scaffold_7 5 CH_cru_528 2 2 0.000219346
Eucalyptus grandis Chr03 5 CH_egr_1390 2 6 0.000877809
Erythranthe guttata scaffold_9 5 CH_egut_105 5 5 0.0000000000000265706
Gossypium hirsutum D03 5 CH_ghi_1199 2 2 0.000560733
Gossypium raimondii Chr03 5 CH_gra_563 2 2 0.000321664
Lupinus albus Lalb_Chr14 5 CH_lal_588 2 2 0.000314895
Lonicera japonica GWHAAZE00000004 5 CH_lonja_900 2 2 0.000179662
Malus domestica Chr10 5 CH_mdo_306 4 9 0.00000000259613
Oryza sativa ssp. japonica chr01 5 CH_osa_576 2 2 0.000158437
Papaver somniferum NC_039359.1 5 CH_pso_1026 2 2 0.000225294
Sechium edule LG03 5 CH_sed_444 2 2 0.000428052
Sechium edule LG10 5 CH_sed_445 2 2 0.000428052
Schrenkiella parvula ch7-5 5 CH_spa_107 3 3 0.0000000929892
Schrenkiella parvula ch7-6 5 CH_spa_357 2 2 0.00078734
Selenicereus undatus Scaffold_2055 5 CH_sun_319 2 2 0.000435983
Anthoceros agrestis Sc2ySwM_117 6 CH_aag_317 2 4 0.000481502
Arabidopsis thaliana Chr4 6 CH_ath_581 2 3 0.000515668
Amborella trichopoda AmTr_v1.0_scaffold00002 6 CH_atr_41 7 7 6.30266e-19
Amborella trichopoda AmTr_v1.0_scaffold00056 6 CH_atr_76 5 5 0.00000000000255987
Brassica carinata Contig281 6 CH_bca_1383 3 15 0.0000890984
Brassica napus C07 6 CH_bna_265 4 5 0.000000000849331
Brassica napus C07 6 CH_bna_573 3 3 0.000000915266
Brassica oleracea C7 6 CH_bol_123 4 5 0.0000000003745
Brassica rapa A09 6 CH_bra_215 3 4 0.00000132688
Capsicum annuum PGAv.1.6.scaffold786 6 CH_can_546 2 2 0.0000826105
Citrus clementina scaffold_1 6 CH_ccl_633 2 2 0.000246093
Cardamine hirsuta Chr7 6 CH_chi_125 4 4 0.000000000014862
Carica papaya supercontig_78 6 CH_cpa_443 2 3 0.000285185
Capsella rubella scaffold_7 6 CH_cru_528 2 2 0.000219346
Eucalyptus grandis Chr03 6 CH_egr_1390 2 6 0.000877809
Erythranthe guttata scaffold_9 6 CH_egut_105 5 5 0.0000000000000265706
Gossypium hirsutum D03 6 CH_ghi_1199 2 2 0.000560733
Gossypium raimondii Chr03 6 CH_gra_563 2 2 0.000321664
Lupinus albus Lalb_Chr14 6 CH_lal_588 2 2 0.000314895
Lonicera japonica GWHAAZE00000004 6 CH_lonja_900 2 2 0.000179662
Malus domestica Chr10 6 CH_mdo_306 4 9 0.00000000259613
Oryza sativa ssp. japonica chr01 6 CH_osa_576 2 2 0.000158437
Papaver somniferum NC_039359.1 6 CH_pso_1026 2 2 0.000225294
Sechium edule LG03 6 CH_sed_444 2 2 0.000428052
Sechium edule LG10 6 CH_sed_445 2 2 0.000428052
Schrenkiella parvula ch7-5 6 CH_spa_107 3 3 0.0000000929892
Schrenkiella parvula ch7-6 6 CH_spa_357 2 2 0.00078734
Selenicereus undatus Scaffold_2055 6 CH_sun_319 2 2 0.000435983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001