Functional clusters

Information

  • Type InterPro
  • Description Alpha/beta hydrolase fold-1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 5 CH_aag_224 4 9 0.000101036
Aethionema arabicum LG-11 5 CH_aar_250 4 6 0.0000484821
Acer truncatum chr3 5 CH_acertr_665 4 8 0.0000887097
Arabidopsis lyrata scaffold_4 5 CH_aly_99 6 6 0.0000000000175554
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 5 CH_amhyb_130 4 4 0.000000998252
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 5 CH_amhyb_193 4 7 0.0000347301
Aquilegia oxysepala CHR06 5 CH_aox_521 3 3 0.000705764
Aquilegia oxysepala CHR06 5 CH_aox_74 6 7 0.000000000123634
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 5 CH_arhy_915 7 75 0.0000758061
Arabidopsis thaliana Chr2 5 CH_ath_54 8 17 0.0000000000000122362
Arabidopsis thaliana Chr1 5 CH_ath_617 3 5 0.000638435
Brassica carinata ChrB06 5 CH_bca_1204 4 6 0.0000358302
Brassica carinata Contig350 5 CH_bca_1485 4 8 0.00016661
Brassica carinata ChrC01 5 CH_bca_787 5 10 0.00000133066
Brassica napus A04 5 CH_bna_171 6 6 0.0000000000129939
Brassica napus C04 5 CH_bna_336 5 5 0.00000000590731
Brassica oleracea C4 5 CH_bol_832 3 3 0.000628355
Camellia sinensis var. sinensis Chr1 5 CH_camsi_194 8 18 0.00000000000137054
Cannabis sativa NC_044373.1 5 CH_cansat_174 5 6 0.0000000273867
Cannabis sativa NC_044372.1 5 CH_cansat_269 4 4 0.00000172
Cannabis sativa NC_044375.1 5 CH_cansat_379 4 7 0.0000598107
Cannabis sativa NC_044370.1 5 CH_cansat_557 3 3 0.000638834
Cannabis sativa NC_044371.1 5 CH_cansat_558 3 3 0.000638834
Capsicum annuum PGAv.1.6.scaffold322 5 CH_can_12 17 24 4.30937e-33
Capsicum annuum PGAv.1.6.scaffold397 5 CH_can_248 5 5 0.0000000129099
Corylus avellana 11 5 CH_cav_437 4 7 0.0000318589
Citrus clementina scaffold_3 5 CH_ccl_195 10 56 0.000000000237242
Citrus clementina scaffold_7 5 CH_ccl_258 5 5 0.0000000157971
Carpinus fangiana Cfa01 5 CH_cfa_626 3 3 0.00094416
Carya illinoinensis Chr01 5 CH_cil_500 4 5 0.0000118395
Citrullus lanatus CG_Chr01 5 CH_cla_165 4 5 0.0000141361
Chenopodium quinoa C_Quinoa_Scaffold_2771 5 CH_cqu_1048 3 3 0.000945779
Chenopodium quinoa C_Quinoa_Scaffold_1516 5 CH_cqu_335 5 7 0.000000150619
Chenopodium quinoa C_Quinoa_Scaffold_1001 5 CH_cqu_688 4 7 0.0000911487
Capsella rubella scaffold_4 5 CH_cru_85 7 7 0.000000000000105457
Cucumis sativus L. chr6 5 CH_csa_101 6 7 0.000000000177052
Daucus carota DCARv2_Chr7 5 CH_dca_155 5 5 0.0000000114137
Davidia involucrata GWHABJS00000010 5 CH_din_415 4 6 0.000017105
Davidia involucrata GWHABJS00000014 5 CH_din_771 3 3 0.000502929
Durio zibethinus NW_019167860.1 5 CH_dzi_314 4 5 0.00000925779
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_172 5 5 0.00000000195987
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_335 4 4 0.000000939218
Eucalyptus grandis Chr07 5 CH_egr_156 11 13 1.23103e-20
Eucalyptus grandis Chr09 5 CH_egr_273 8 8 0.0000000000000026345
Erythranthe guttata scaffold_8 5 CH_egut_474 4 7 0.0000574491
Eutrema salsugineum scaffold_15 5 CH_esa_245 5 11 0.00000475941
Fragaria vesca Fvb1 5 CH_fve_51 10 17 4.11499e-18
Glycine max Gm02 5 CH_gma_85 7 7 0.0000000000000362244
Lupinus albus Lalb_Chr20 5 CH_lal_182 5 7 0.0000000727551
Lotus japonicus chr4 5 CH_lja_323 4 5 0.0000100567
Lonicera japonica GWHAAZE00000009 5 CH_lonja_615 4 4 0.00000709463
Lonicera japonica GWHAAZE00000004 5 CH_lonja_684 4 5 0.0000353658
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_521 4 5 0.0000100986
Malus domestica Chr17 5 CH_mdo_1267 4 10 0.000397869
Malus domestica Chr02 5 CH_mdo_44 11 18 2.38675e-20
Manihot esculenta Chromosome13 5 CH_mes_103 9 15 0.00000000000000741303
Manihot esculenta Chromosome13 5 CH_mes_175 6 6 0.0000000000457135
Manihot esculenta Chromosome12 5 CH_mes_254 5 5 0.0000000139913
Manihot esculenta Chromosome13 5 CH_mes_280 5 6 0.0000000837169
Manihot esculenta Chromosome12 5 CH_mes_366 5 9 0.00000174357
Medicago truncatula chr5 5 CH_mtr_497 5 7 0.0000000303851
Medicago truncatula chr8 5 CH_mtr_538 5 8 0.0000000808962
Oryza sativa ssp. japonica chr03 5 CH_osa_683 3 3 0.000428171
Oryza sativa ssp. japonica chr01 5 CH_osa_684 3 3 0.000428171
Prunus persica Pp07 5 CH_ppe_80 10 14 1.07626e-18
Pisum sativum chr4LG4 5 CH_psa_320 4 5 0.00000371801
Pisum sativum chr2LG1 5 CH_psa_642 3 3 0.000361471
Papaver somniferum NC_039366.1 5 CH_pso_528 4 4 0.000000401963
Populus trichocarpa Chr05 5 CH_ptr_434 4 4 0.00000346976
Populus trichocarpa Chr09 5 CH_ptr_435 4 4 0.00000346976
Populus trichocarpa Chr07 5 CH_ptr_88 9 12 1.94886e-16
Phaseolus vulgaris Chr03 5 CH_pvu_213 5 6 0.0000000314581
Phaseolus vulgaris Chr02 5 CH_pvu_658 3 3 0.000665303
Quercus lobata 6 5 CH_qlo_1754 3 3 0.000728128
Quercus lobata 6 5 CH_qlo_211 10 17 9.23995e-18
Quercus lobata 8 5 CH_qlo_845 5 8 0.000000272701
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1005 4 8 0.0000403393
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_257 8 22 0.00000000000175651
Rhododendron simsii chr08 5 CH_rsi_234 8 22 0.0000000000422476
Rhododendron simsii chr01 5 CH_rsi_571 4 5 0.0000112378
Rhododendron simsii chr03 5 CH_rsi_619 4 6 0.0000336357
Salix brachista GWHAAZH00000007 5 CH_sbr_21 14 20 2.40828e-27
Sechium edule LG14 5 CH_sed_484 3 3 0.000580824
Sequoiadendron giganteum chr10 5 CH_sgi_1400 6 30 0.00000442769
Sequoiadendron giganteum chr1 5 CH_sgi_176 13 33 1.22203e-21
Sequoiadendron giganteum chr11 5 CH_sgi_2510 3 3 0.000593246
Sequoiadendron giganteum chr7 5 CH_sgi_835 6 11 0.00000000357914
Solanum lycopersicum SL4.0ch09 5 CH_sly_156 6 6 0.0000000000175673
Solanum lycopersicum SL4.0ch05 5 CH_sly_924 3 3 0.000810539
Solanum pennellii Spenn-ch09 5 CH_spe_101 6 6 0.00000000000496534
Solanum pennellii Spenn-ch02 5 CH_spe_181 5 5 0.00000000232549
Solanum pennellii Spenn-ch03 5 CH_spe_751 4 11 0.000351385
Solanum tuberosum ST4.03ch02 5 CH_stu_480 4 5 0.0000075844
Solanum tuberosum ST4.03ch09 5 CH_stu_886 3 3 0.000617862
Theobroma cacao Chromosome_1 5 CH_tca_48 10 13 2.61327e-19
Trifolium pratense Tp57577_TGAC_v2_scaf_459 5 CH_tpr_659 3 3 0.00037545
Tripterygium wilfordii NC_052232.1 5 CH_twi_229 4 4 0.00000158539
Vigna mungo CM024069.1 5 CH_vmu_296 4 7 0.0000401722
Vigna mungo CM024074.1 5 CH_vmu_558 3 3 0.000476439
Vitis vinifera chrUn 5 CH_vvi_212 5 5 0.00000000530108
Vitis vinifera chr14 5 CH_vvi_732 3 3 0.00066024
Zea mays 3 5 CH_zma_348 4 8 0.0000620614
Anthoceros agrestis Sc2ySwM_368 6 CH_aag_224 4 9 0.000101036
Aethionema arabicum LG-11 6 CH_aar_250 4 6 0.0000484821
Acer truncatum chr3 6 CH_acertr_665 4 8 0.0000887097
Arabidopsis lyrata scaffold_4 6 CH_aly_99 6 6 0.0000000000175554
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 6 CH_amhyb_130 4 4 0.000000998252
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 6 CH_amhyb_193 4 7 0.0000347301
Aquilegia oxysepala CHR06 6 CH_aox_521 3 3 0.000705764
Aquilegia oxysepala CHR06 6 CH_aox_74 6 7 0.000000000123634
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 6 CH_arhy_915 7 75 0.0000758061
Arabidopsis thaliana Chr2 6 CH_ath_54 8 17 0.0000000000000122362
Arabidopsis thaliana Chr1 6 CH_ath_617 3 5 0.000638435
Brassica carinata ChrB06 6 CH_bca_1204 4 6 0.0000358302
Brassica carinata Contig350 6 CH_bca_1485 4 8 0.00016661
Brassica carinata ChrC01 6 CH_bca_787 5 10 0.00000133066
Brassica napus A04 6 CH_bna_171 6 6 0.0000000000129939
Brassica napus C04 6 CH_bna_336 5 5 0.00000000590731
Brassica oleracea C4 6 CH_bol_832 3 3 0.000628355
Camellia sinensis var. sinensis Chr1 6 CH_camsi_194 8 18 0.00000000000137054
Cannabis sativa NC_044373.1 6 CH_cansat_174 5 6 0.0000000273867
Cannabis sativa NC_044372.1 6 CH_cansat_269 4 4 0.00000172
Cannabis sativa NC_044375.1 6 CH_cansat_379 4 7 0.0000598107
Cannabis sativa NC_044370.1 6 CH_cansat_557 3 3 0.000638834
Cannabis sativa NC_044371.1 6 CH_cansat_558 3 3 0.000638834
Capsicum annuum PGAv.1.6.scaffold322 6 CH_can_12 17 24 4.30937e-33
Capsicum annuum PGAv.1.6.scaffold397 6 CH_can_248 5 5 0.0000000129099
Corylus avellana 11 6 CH_cav_437 4 7 0.0000318589
Citrus clementina scaffold_3 6 CH_ccl_195 10 56 0.000000000237242
Citrus clementina scaffold_7 6 CH_ccl_258 5 5 0.0000000157971
Carpinus fangiana Cfa01 6 CH_cfa_626 3 3 0.00094416
Carya illinoinensis Chr01 6 CH_cil_500 4 5 0.0000118395
Citrullus lanatus CG_Chr01 6 CH_cla_165 4 5 0.0000141361
Cucumis melo chr08 6 CH_cme_202 4 4 0.000000969528
Chenopodium quinoa C_Quinoa_Scaffold_2771 6 CH_cqu_1048 3 3 0.000945779
Chenopodium quinoa C_Quinoa_Scaffold_1516 6 CH_cqu_335 5 7 0.000000150619
Chenopodium quinoa C_Quinoa_Scaffold_1001 6 CH_cqu_688 4 7 0.0000911487
Capsella rubella scaffold_4 6 CH_cru_85 7 7 0.000000000000105457
Cucumis sativus L. chr6 6 CH_csa_101 6 7 0.000000000177052
Daucus carota DCARv2_Chr7 6 CH_dca_155 5 5 0.0000000114137
Davidia involucrata GWHABJS00000010 6 CH_din_415 4 6 0.000017105
Davidia involucrata GWHABJS00000014 6 CH_din_771 3 3 0.000502929
Durio zibethinus NW_019167860.1 6 CH_dzi_314 4 5 0.00000925779
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_172 5 5 0.00000000195987
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_335 4 4 0.000000939218
Eucalyptus grandis Chr07 6 CH_egr_156 11 13 1.23103e-20
Eucalyptus grandis Chr09 6 CH_egr_273 8 8 0.0000000000000026345
Erythranthe guttata scaffold_8 6 CH_egut_474 4 7 0.0000574491
Eutrema salsugineum scaffold_15 6 CH_esa_245 5 11 0.00000475941
Fragaria x ananassa Fvb1-2 6 CH_fan_364 7 35 0.000000217557
Fragaria x ananassa Fvb1-4 6 CH_fan_924 4 8 0.000206492
Fragaria vesca Fvb1 6 CH_fve_51 10 17 4.11499e-18
Glycine max Gm02 6 CH_gma_85 7 7 0.0000000000000362244
Lupinus albus Lalb_Chr20 6 CH_lal_182 5 7 0.0000000727551
Lotus japonicus chr4 6 CH_lja_323 4 5 0.0000100567
Lonicera japonica GWHAAZE00000009 6 CH_lonja_615 4 4 0.00000709463
Lonicera japonica GWHAAZE00000004 6 CH_lonja_684 4 5 0.0000353658
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_521 4 5 0.0000100986
Malus domestica Chr17 6 CH_mdo_1267 4 10 0.000397869
Malus domestica Chr02 6 CH_mdo_44 11 18 2.38675e-20
Manihot esculenta Chromosome13 6 CH_mes_103 9 15 0.00000000000000741303
Manihot esculenta Chromosome13 6 CH_mes_175 6 6 0.0000000000457135
Manihot esculenta Chromosome12 6 CH_mes_254 5 5 0.0000000139913
Manihot esculenta Chromosome13 6 CH_mes_280 5 6 0.0000000837169
Manihot esculenta Chromosome12 6 CH_mes_366 5 9 0.00000174357
Medicago truncatula chr5 6 CH_mtr_497 5 7 0.0000000303851
Medicago truncatula chr8 6 CH_mtr_538 5 8 0.0000000808962
Oryza sativa ssp. japonica chr03 6 CH_osa_683 3 3 0.000428171
Oryza sativa ssp. japonica chr01 6 CH_osa_684 3 3 0.000428171
Prunus persica Pp07 6 CH_ppe_80 10 14 1.07626e-18
Pisum sativum chr4LG4 6 CH_psa_320 4 5 0.00000371801
Pisum sativum chr2LG1 6 CH_psa_642 3 3 0.000361471
Papaver somniferum NC_039366.1 6 CH_pso_528 4 4 0.000000401963
Populus trichocarpa Chr05 6 CH_ptr_434 4 4 0.00000346976
Populus trichocarpa Chr09 6 CH_ptr_435 4 4 0.00000346976
Populus trichocarpa Chr07 6 CH_ptr_88 9 12 1.94886e-16
Phaseolus vulgaris Chr03 6 CH_pvu_213 5 6 0.0000000314581
Phaseolus vulgaris Chr02 6 CH_pvu_658 3 3 0.000665303
Quercus lobata 6 6 CH_qlo_1754 3 3 0.000728128
Quercus lobata 6 6 CH_qlo_211 10 17 9.23995e-18
Quercus lobata 8 6 CH_qlo_845 5 8 0.000000272701
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1005 4 8 0.0000403393
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_257 8 22 0.00000000000175651
Rhododendron simsii chr08 6 CH_rsi_234 8 22 0.0000000000422476
Rhododendron simsii chr01 6 CH_rsi_571 4 5 0.0000112378
Rhododendron simsii chr03 6 CH_rsi_619 4 6 0.0000336357
Salix brachista GWHAAZH00000007 6 CH_sbr_21 14 20 2.40828e-27
Sechium edule LG14 6 CH_sed_484 3 3 0.000580824
Sequoiadendron giganteum chr10 6 CH_sgi_1400 6 30 0.00000442769
Sequoiadendron giganteum chr1 6 CH_sgi_176 13 33 1.22203e-21
Sequoiadendron giganteum chr11 6 CH_sgi_2510 3 3 0.000593246
Sequoiadendron giganteum chr7 6 CH_sgi_835 6 11 0.00000000357914
Solanum lycopersicum SL4.0ch09 6 CH_sly_156 6 6 0.0000000000175673
Solanum lycopersicum SL4.0ch05 6 CH_sly_924 3 3 0.000810539
Solanum pennellii Spenn-ch09 6 CH_spe_101 6 6 0.00000000000496534
Solanum pennellii Spenn-ch02 6 CH_spe_181 5 5 0.00000000232549
Solanum pennellii Spenn-ch03 6 CH_spe_751 4 11 0.000351385
Solanum tuberosum ST4.03ch02 6 CH_stu_480 4 5 0.0000075844
Solanum tuberosum ST4.03ch09 6 CH_stu_886 3 3 0.000617862
Theobroma cacao Chromosome_1 6 CH_tca_48 10 13 2.61327e-19
Trifolium pratense Tp57577_TGAC_v2_scaf_459 6 CH_tpr_659 3 3 0.00037545
Tripterygium wilfordii NC_052232.1 6 CH_twi_229 4 4 0.00000158539
Vigna mungo CM024069.1 6 CH_vmu_296 4 7 0.0000401722
Vigna mungo CM024074.1 6 CH_vmu_558 3 3 0.000476439
Vitis vinifera chrUn 6 CH_vvi_212 5 5 0.00000000530108
Vitis vinifera chr14 6 CH_vvi_732 3 3 0.00066024
Zea mays 3 6 CH_zma_348 4 8 0.0000620614

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001