Functional clusters
Information
- Type InterPro
- Description Zinc finger, AN1-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB07 | 5 | CH_bca_256 | 5 | 9 | 0.000000000270089 |
| Capsicum annuum | PGAv.1.6.scaffold1144 | 5 | CH_can_24 | 13 | 21 | 7.92349e-28 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3489 | 5 | CH_cqu_196 | 4 | 4 | 0.000000000435641 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_401 | 3 | 4 | 0.0000113765 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_361 | 3 | 5 | 0.0000139283 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_286 | 5 | 13 | 0.000000000421696 |
| Phaseolus vulgaris | Chr04 | 5 | CH_pvu_44 | 8 | 9 | 4.12905e-21 |
| Solanum tuberosum | ST4.03ch07 | 5 | CH_stu_496 | 3 | 4 | 0.0000107115 |
| Brassica carinata | ChrB07 | 6 | CH_bca_256 | 5 | 9 | 0.000000000270089 |
| Capsicum annuum | PGAv.1.6.scaffold1144 | 6 | CH_can_24 | 13 | 21 | 7.92349e-28 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3489 | 6 | CH_cqu_196 | 4 | 4 | 0.000000000435641 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_401 | 3 | 4 | 0.0000113765 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_361 | 3 | 5 | 0.0000139283 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_286 | 5 | 13 | 0.000000000421696 |
| Phaseolus vulgaris | Chr04 | 6 | CH_pvu_44 | 8 | 9 | 4.12905e-21 |
| Solanum tuberosum | ST4.03ch07 | 6 | CH_stu_496 | 3 | 4 | 0.0000107115 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |