Functional clusters
Information
- Type InterPro
- Description Helix-turn-helix motif
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_419 | 4 | 5 | 0.0000000182889 |
| Camellia sinensis var. sinensis | Chr9 | 5 | CH_camsi_791 | 4 | 17 | 0.00000866296 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_688 | 4 | 39 | 0.00000511423 |
| Rhododendron simsii | chr03 | 5 | CH_rsi_737 | 3 | 7 | 0.000148447 |
| Solanum lycopersicum | SL4.0ch03 | 5 | CH_sly_288 | 4 | 5 | 0.0000000620695 |
| Solanum pennellii | Spenn-ch03 | 5 | CH_spe_229 | 4 | 5 | 0.0000000197264 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_382 | 4 | 8 | 0.000000495025 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_419 | 4 | 5 | 0.0000000182889 |
| Camellia sinensis var. sinensis | Chr9 | 6 | CH_camsi_791 | 4 | 17 | 0.00000866296 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_688 | 4 | 39 | 0.00000511423 |
| Rhododendron simsii | chr03 | 6 | CH_rsi_737 | 3 | 7 | 0.000148447 |
| Solanum lycopersicum | SL4.0ch03 | 6 | CH_sly_288 | 4 | 5 | 0.0000000620695 |
| Solanum pennellii | Spenn-ch03 | 6 | CH_spe_229 | 4 | 5 | 0.0000000197264 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_382 | 4 | 8 | 0.000000495025 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |