Functional clusters
Information
- Type Gene Ontology
- Description regulation of salicylic acid mediated signaling pathway
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 3 | CH_atr_171 | 3 | 3 | 0.0000246132 |
| Brassica carinata | ChrB08 | 3 | CH_bca_843 | 3 | 5 | 0.000481287 |
| Corylus avellana | 8 | 3 | CH_cav_392 | 3 | 5 | 0.00068374 |
| Corchorus olitorius | AWUE01016378.1 | 3 | CH_col_48 | 3 | 3 | 0.0000107521 |
| Glycine max | Gm05 | 3 | CH_gma_310 | 3 | 3 | 0.0000817288 |
| Medicago truncatula | chr8 | 3 | CH_mtr_165 | 5 | 6 | 0.00000000012337 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_1183 | 3 | 4 | 0.000215978 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_251 | 3 | 3 | 0.0000438997 |
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 4 | CH_atr_171 | 3 | 3 | 0.0000246132 |
| Brassica carinata | ChrB08 | 4 | CH_bca_843 | 3 | 5 | 0.000481287 |
| Corylus avellana | 8 | 4 | CH_cav_392 | 3 | 5 | 0.00068374 |
| Corchorus olitorius | AWUE01016378.1 | 4 | CH_col_48 | 3 | 3 | 0.0000107521 |
| Glycine max | Gm05 | 4 | CH_gma_310 | 3 | 3 | 0.0000817288 |
| Medicago truncatula | chr8 | 4 | CH_mtr_165 | 5 | 6 | 0.00000000012337 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_1183 | 3 | 4 | 0.000215978 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_251 | 3 | 3 | 0.0000438997 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0080151 | positive regulation of salicylic acid mediated signaling pathway | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |