Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of photoperiodism, flowering

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 3 CH_bca_852 3 3 0.000513158
Corylus avellana 4 3 CH_cav_195 4 7 0.0000160636
Durio zibethinus NW_019167982.1 3 CH_dzi_197 4 7 0.0000407763
Lupinus albus Lalb_Chr25 3 CH_lal_388 3 3 0.000628417
Medicago truncatula chr1 3 CH_mtr_156 6 9 0.0000000000612803
Medicago truncatula chr8 3 CH_mtr_594 3 3 0.000200242
Olea europaea chr18 3 CH_oeu_349 3 4 0.000781319
Quercus lobata 5 3 CH_qlo_1021 4 14 0.000822743
Sequoiadendron giganteum chr3 3 CH_sgi_1164 3 3 0.000170534
Sequoiadendron giganteum chr7 3 CH_sgi_881 4 8 0.0000185169
Brassica carinata ChrC01 4 CH_bca_852 3 3 0.000513158
Corylus avellana 4 4 CH_cav_195 4 7 0.0000160636
Durio zibethinus NW_019167982.1 4 CH_dzi_197 4 7 0.0000407763
Lupinus albus Lalb_Chr25 4 CH_lal_388 3 3 0.000628417
Medicago truncatula chr1 4 CH_mtr_156 6 9 0.0000000000612803
Medicago truncatula chr8 4 CH_mtr_594 3 3 0.000200242
Olea europaea chr18 4 CH_oeu_349 3 4 0.000781319
Quercus lobata 5 4 CH_qlo_1021 4 14 0.000822743
Sequoiadendron giganteum chr3 4 CH_sgi_1164 3 3 0.000170534
Sequoiadendron giganteum chr7 4 CH_sgi_881 4 8 0.0000185169

Available child term results

Ontology identifier Description Number of clusters
GO:0048577 negative regulation of short-day photoperiodism, flowering 2
GO:0048587 regulation of short-day photoperiodism, flowering 14

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001