Functional clusters
Information
- Type Gene Ontology
- Description regulation of jasmonic acid mediated signaling pathway
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Carya illinoinensis | Chr04 | 3 | CH_cil_376 | 3 | 3 | 0.000127362 |
| Hydrangea macrophylla | Hma1.2p1_0088F.1 | 3 | CH_hma_55 | 4 | 4 | 0.0000000721861 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_271 | 3 | 3 | 0.0000445994 |
| Oryza sativa ssp. japonica | chr10 | 3 | CH_osa_366 | 3 | 4 | 0.000178259 |
| Sequoiadendron giganteum | chr7 | 3 | CH_sgi_562 | 4 | 4 | 0.0000000428051 |
| Solanum lycopersicum | SL4.0ch08 | 3 | CH_sly_367 | 3 | 3 | 0.0000637738 |
| Solanum tuberosum | ST4.03ch08 | 3 | CH_stu_363 | 4 | 14 | 0.0000448746 |
| Zea mays | 1 | 3 | CH_zma_249 | 3 | 3 | 0.000224145 |
| Zea mays | 1 | 3 | CH_zma_346 | 3 | 4 | 0.00089539 |
| Carya illinoinensis | Chr04 | 4 | CH_cil_376 | 3 | 3 | 0.000127362 |
| Hydrangea macrophylla | Hma1.2p1_0088F.1 | 4 | CH_hma_55 | 4 | 4 | 0.0000000721861 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_271 | 3 | 3 | 0.0000445994 |
| Oryza sativa ssp. japonica | chr10 | 4 | CH_osa_366 | 3 | 4 | 0.000178259 |
| Sequoiadendron giganteum | chr7 | 4 | CH_sgi_562 | 4 | 4 | 0.0000000428051 |
| Solanum lycopersicum | SL4.0ch08 | 4 | CH_sly_367 | 3 | 3 | 0.0000637738 |
| Solanum tuberosum | ST4.03ch08 | 4 | CH_stu_363 | 4 | 14 | 0.0000448746 |
| Zea mays | 1 | 4 | CH_zma_249 | 3 | 3 | 0.000224145 |
| Zea mays | 1 | 4 | CH_zma_346 | 3 | 4 | 0.00089539 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |