Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of protein localization to cell surface

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 3 CH_aly_328 2 2 0.000660044
Arabidopsis thaliana Chr5 3 CH_ath_25 11 61 2.09608e-19
Capsella rubella scaffold_4 3 CH_cru_331 2 2 0.000731154
Daucus carota DCARv2_Chr1 3 CH_dca_43 4 6 0.0000000000116743
Eutrema salsugineum scaffold_15 3 CH_esa_270 2 2 0.000761499
Helianthus annuus HanXRQChr02 3 CH_han_686 2 2 0.000579643
Manihot esculenta Chromosome12 3 CH_mes_336 2 2 0.000183189
Papaver somniferum NC_039361.1 3 CH_pso_664 3 17 0.000687008
Quercus lobata 10 3 CH_qlo_237 4 4 0.0000000000289022
Quercus lobata 6 3 CH_qlo_457 3 3 0.000000223911
Rhododendron simsii chr10 3 CH_rsi_417 2 2 0.000193592
Sechium edule LG11 3 CH_sed_73 3 3 0.0000000305391
Solanum lycopersicum SL4.0ch05 3 CH_sly_162 4 14 0.000000127308
Schrenkiella parvula ch4-1 3 CH_spa_213 2 2 0.00078734
Trochodendron aralioides group11 3 CH_tar_112 4 17 0.0000000540104
Theobroma cacao Chromosome_4 3 CH_tca_392 2 2 0.000732386
Arabidopsis lyrata scaffold_4 4 CH_aly_328 2 2 0.000660044
Arabidopsis thaliana Chr5 4 CH_ath_25 11 61 2.09608e-19
Capsella rubella scaffold_4 4 CH_cru_331 2 2 0.000731154
Daucus carota DCARv2_Chr1 4 CH_dca_43 4 6 0.0000000000116743
Eutrema salsugineum scaffold_15 4 CH_esa_270 2 2 0.000761499
Helianthus annuus HanXRQChr02 4 CH_han_686 2 2 0.000579643
Manihot esculenta Chromosome12 4 CH_mes_336 2 2 0.000183189
Papaver somniferum NC_039361.1 4 CH_pso_664 3 17 0.000687008
Quercus lobata 10 4 CH_qlo_237 4 4 0.0000000000289022
Quercus lobata 6 4 CH_qlo_457 3 3 0.000000223911
Rhododendron simsii chr10 4 CH_rsi_417 2 2 0.000193592
Sechium edule LG11 4 CH_sed_73 3 3 0.0000000305391
Solanum lycopersicum SL4.0ch05 4 CH_sly_162 4 14 0.000000127308
Schrenkiella parvula ch4-1 4 CH_spa_213 2 2 0.00078734
Trochodendron aralioides group11 4 CH_tar_112 4 17 0.0000000540104
Theobroma cacao Chromosome_4 4 CH_tca_392 2 2 0.000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001