Functional clusters

Information

  • Type Gene Ontology
  • Description callus formation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr13 3 CH_camsi_348 4 11 0.0000016701
Corylus avellana 10 3 CH_cav_32 6 8 0.000000000000124435
Coffea canephora chr6 3 CH_ccan_113 3 6 0.00000110124
Coffea canephora chr6 3 CH_ccan_315 3 32 0.000272855
Citrus clementina scaffold_9 3 CH_ccl_177 4 5 0.000000169412
Citrus clementina scaffold_3 3 CH_ccl_71 6 8 0.000000000000880532
Carpinus fangiana Cfa07 3 CH_cfa_118 4 6 0.00000020747
Carya illinoinensis Chr03 3 CH_cil_328 3 4 0.0000599011
Phaseolus vulgaris Chr01 3 CH_pvu_217 3 4 0.0000430566
Quercus lobata 10 3 CH_qlo_107 9 31 1.43032e-17
Salvia bowleyana GWHASIU00000002 3 CH_sbo_291 4 25 0.0000212448
Camellia sinensis var. sinensis Chr13 4 CH_camsi_348 4 11 0.0000016701
Corylus avellana 10 4 CH_cav_32 6 8 0.000000000000124435
Coffea canephora chr6 4 CH_ccan_113 3 6 0.00000110124
Coffea canephora chr6 4 CH_ccan_315 3 32 0.000272855
Citrus clementina scaffold_9 4 CH_ccl_177 4 5 0.000000169412
Citrus clementina scaffold_3 4 CH_ccl_71 6 8 0.000000000000880532
Carpinus fangiana Cfa07 4 CH_cfa_118 4 6 0.00000020747
Carya illinoinensis Chr03 4 CH_cil_328 3 4 0.0000599011
Phaseolus vulgaris Chr01 4 CH_pvu_217 3 4 0.0000430566
Quercus lobata 10 4 CH_qlo_107 9 31 1.43032e-17
Salvia bowleyana GWHASIU00000002 4 CH_sbo_291 4 25 0.0000212448

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001