Functional clusters

Information

  • Type Gene Ontology
  • Description SCF ubiquitin ligase complex binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Eucalyptus grandis Chr01 3 CH_egr_687 2 2 0.0000585274
Helianthus annuus HanXRQChr15 3 CH_han_535 2 2 0.000115929
Magnolia biondii Chr18 3 CH_mbi_473 2 3 0.000145695
Medicago truncatula chr1 3 CH_mtr_494 2 2 0.0000410863
Solanum lycopersicum SL4.0ch03 3 CH_sly_236 3 6 0.00000206646
Solanum pennellii Spenn-ch03 3 CH_spe_112 3 4 0.0000000118703
Solanum tuberosum ST4.03ch01 3 CH_stu_545 3 22 0.000338933
Solanum tuberosum ST4.03ch03 3 CH_stu_90 5 11 0.00000000000133764
Eucalyptus grandis Chr01 4 CH_egr_687 2 2 0.0000585274
Helianthus annuus HanXRQChr15 4 CH_han_535 2 2 0.000115929
Magnolia biondii Chr18 4 CH_mbi_473 2 3 0.000145695
Medicago truncatula chr1 4 CH_mtr_494 2 2 0.0000410863
Solanum lycopersicum SL4.0ch03 4 CH_sly_236 3 6 0.00000206646
Solanum pennellii Spenn-ch03 4 CH_spe_112 3 4 0.0000000118703
Solanum tuberosum ST4.03ch01 4 CH_stu_545 3 22 0.000338933
Solanum tuberosum ST4.03ch03 4 CH_stu_90 5 11 0.00000000000133764

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001