Functional clusters

Information

  • Type Gene Ontology
  • Description nucleoside transmembrane transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 3 CH_amhyb_216 2 2 0.000841751
Beta vulgaris Chr6_EL10_PGA_scaffold0 3 CH_bvu_96 3 4 0.000000411243
Camellia sinensis var. sinensis Chr8 3 CH_camsi_128 5 11 0.0000000000946657
Cardamine hirsuta Chr2 3 CH_chi_104 4 9 0.0000000411505
Cardamine hirsuta Chr8 3 CH_chi_39 5 5 0.0000000000000791078
Chenopodium quinoa C_Quinoa_Scaffold_3035 3 CH_cqu_264 3 3 0.00000774566
Chenopodium quinoa C_Quinoa_Scaffold_2715 3 CH_cqu_314 3 4 0.0000309698
Capsella rubella scaffold_6 3 CH_cru_142 3 3 0.000000962292
Helianthus annuus HanXRQChr12 3 CH_han_325 3 3 0.00000125437
Magnolia biondii Chr18 3 CH_mbi_350 3 5 0.0000128728
Magnolia biondii Chr11 3 CH_mbi_60 5 5 0.0000000000000835451
Manihot esculenta Chromosome13 3 CH_mes_434 2 2 0.000915947
Medicago truncatula chr2 3 CH_mtr_55 6 7 9.22959e-17
Petunia axillaris Peaxi162Scf00371 3 CH_pax_92 3 3 0.000000415808
Populus trichocarpa Chr04 3 CH_ptr_214 3 3 0.00000042096
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_146 4 4 0.0000000000133054
Salvia bowleyana GWHASIU00000005 3 CH_sbo_99 4 5 0.0000000000211915
Salix brachista GWHAAZH00000004 3 CH_sbr_143 3 3 0.000000333554
Sapria himalayana scaffold38_5640129 3 CH_shi_260 2 2 0.000857706
Sapria himalayana scaffold14_12630789 3 CH_shi_261 2 2 0.000857706
Tripterygium wilfordii NC_052237.1 3 CH_twi_146 3 5 0.00000392041
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_401 2 2 0.000929238
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 4 CH_amhyb_216 2 2 0.000841751
Beta vulgaris Chr6_EL10_PGA_scaffold0 4 CH_bvu_96 3 4 0.000000411243
Camellia sinensis var. sinensis Chr8 4 CH_camsi_128 5 11 0.0000000000946657
Cardamine hirsuta Chr2 4 CH_chi_104 4 9 0.0000000411505
Cardamine hirsuta Chr8 4 CH_chi_39 5 5 0.0000000000000791078
Chenopodium quinoa C_Quinoa_Scaffold_3035 4 CH_cqu_264 3 3 0.00000774566
Chenopodium quinoa C_Quinoa_Scaffold_2715 4 CH_cqu_314 3 4 0.0000309698
Capsella rubella scaffold_6 4 CH_cru_142 3 3 0.000000962292
Helianthus annuus HanXRQChr12 4 CH_han_325 3 3 0.00000125437
Magnolia biondii Chr18 4 CH_mbi_350 3 5 0.0000128728
Magnolia biondii Chr11 4 CH_mbi_60 5 5 0.0000000000000835451
Manihot esculenta Chromosome13 4 CH_mes_434 2 2 0.000915947
Medicago truncatula chr2 4 CH_mtr_55 6 7 9.22959e-17
Petunia axillaris Peaxi162Scf00371 4 CH_pax_92 3 3 0.000000415808
Populus trichocarpa Chr04 4 CH_ptr_214 3 3 0.00000042096
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_146 4 4 0.0000000000133054
Salvia bowleyana GWHASIU00000005 4 CH_sbo_99 4 5 0.0000000000211915
Salix brachista GWHAAZH00000004 4 CH_sbr_143 3 3 0.000000333554
Sapria himalayana scaffold38_5640129 4 CH_shi_260 2 2 0.000857706
Sapria himalayana scaffold14_12630789 4 CH_shi_261 2 2 0.000857706
Tripterygium wilfordii NC_052237.1 4 CH_twi_146 3 5 0.00000392041
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_401 2 2 0.000929238

Available child term results

Ontology identifier Description Number of clusters
GO:0015860 purine nucleoside transmembrane transport 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001