Functional clusters

Information

  • Type Gene Ontology
  • Description hydrocarbon metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Trifolium pratense Tp57577_TGAC_v2_LG6 3 CH_tpr_263 3 3 0.000225502
Trifolium pratense Tp57577_TGAC_v2_LG6 4 CH_tpr_263 3 3 0.000225502

Available child term results

Ontology identifier Description Number of clusters
GO:0009693 ethylene biosynthetic process 12
GO:0010241 ent-kaurene oxidation to kaurenoic acid 34
GO:0010364 regulation of ethylene biosynthetic process 4
GO:0010365 positive regulation of ethylene biosynthetic process 16
GO:0010366 negative regulation of ethylene biosynthetic process 4
GO:0016121 carotene catabolic process 4
GO:0042214 terpene metabolic process 2
GO:0043447 alkane biosynthetic process 6
GO:0043692 monoterpene metabolic process 2
GO:0043693 monoterpene biosynthetic process 4
GO:0051762 sesquiterpene biosynthetic process 14
GO:0052889 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene 4
GO:1901811 beta-carotene catabolic process 10
GO:1901937 beta-caryophyllene biosynthetic process 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001