Functional clusters
Information
- Type Gene Ontology
- Description fluorescent chlorophyll catabolite monooxygenase (deformylase) activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_117 | 3 | CH_aag_106 | 3 | 24 | 0.0000781092 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 3 | CH_bvu_181 | 2 | 2 | 0.0000827917 |
| Citrus clementina | scaffold_4 | 3 | CH_ccl_75 | 4 | 4 | 0.00000000000165619 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_105 | 4 | 5 | 0.00000000000357217 |
| Daucus carota | DCARv2_Chr9 | 3 | CH_dca_243 | 2 | 2 | 0.0000637775 |
| Durio zibethinus | NW_019168492.1 | 3 | CH_dzi_201 | 2 | 2 | 0.0000463489 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_5 | 16 | 24 | 1.52532e-49 |
| Glycine max | Gm20 | 3 | CH_gma_141 | 3 | 4 | 0.0000000345748 |
| Lupinus albus | Lalb_Chr01 | 3 | CH_lal_286 | 2 | 2 | 0.000157447 |
| Malus domestica | Chr01 | 3 | CH_mdo_40 | 5 | 9 | 0.00000000000000195423 |
| Medicago truncatula | chr2 | 3 | CH_mtr_65 | 5 | 10 | 0.00000000000000538592 |
| Olea europaea | chr17 | 3 | CH_oeu_16 | 4 | 4 | 0.000000000000456315 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_46 | 5 | 15 | 0.000000000000713874 |
| Populus trichocarpa | Chr07 | 3 | CH_ptr_91 | 4 | 4 | 0.00000000000289678 |
| Quercus lobata | 9 | 3 | CH_qlo_370 | 3 | 4 | 0.0000000159933 |
| Sechium edule | LG01 | 3 | CH_sed_174 | 2 | 2 | 0.0000713419 |
| Selaginella moellendorffii | scaffold_14 | 3 | CH_smo_143 | 2 | 3 | 0.000280099 |
| Tripterygium wilfordii | NC_052246.1 | 3 | CH_twi_38 | 4 | 4 | 0.00000000000260465 |
| Anthoceros agrestis | Sc2ySwM_117 | 4 | CH_aag_106 | 3 | 24 | 0.0000781092 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 4 | CH_bvu_181 | 2 | 2 | 0.0000827917 |
| Citrus clementina | scaffold_4 | 4 | CH_ccl_75 | 4 | 4 | 0.00000000000165619 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_105 | 4 | 5 | 0.00000000000357217 |
| Daucus carota | DCARv2_Chr9 | 4 | CH_dca_243 | 2 | 2 | 0.0000637775 |
| Durio zibethinus | NW_019168492.1 | 4 | CH_dzi_201 | 2 | 2 | 0.0000463489 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_5 | 16 | 24 | 1.52532e-49 |
| Glycine max | Gm20 | 4 | CH_gma_141 | 3 | 4 | 0.0000000345748 |
| Lupinus albus | Lalb_Chr01 | 4 | CH_lal_286 | 2 | 2 | 0.000157447 |
| Malus domestica | Chr01 | 4 | CH_mdo_40 | 5 | 9 | 0.00000000000000195423 |
| Medicago truncatula | chr2 | 4 | CH_mtr_65 | 5 | 10 | 0.00000000000000538592 |
| Olea europaea | chr17 | 4 | CH_oeu_16 | 4 | 4 | 0.000000000000456315 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_46 | 5 | 15 | 0.000000000000713874 |
| Populus trichocarpa | Chr07 | 4 | CH_ptr_91 | 4 | 4 | 0.00000000000289678 |
| Quercus lobata | 9 | 4 | CH_qlo_370 | 3 | 4 | 0.0000000159933 |
| Sechium edule | LG01 | 4 | CH_sed_174 | 2 | 2 | 0.0000713419 |
| Selaginella moellendorffii | scaffold_14 | 4 | CH_smo_143 | 2 | 3 | 0.000280099 |
| Tripterygium wilfordii | NC_052246.1 | 4 | CH_twi_38 | 4 | 4 | 0.00000000000260465 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |