Functional clusters
Information
- Type Gene Ontology
- Description rhamnogalacturonan endolyase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_183 | 3 | 5 | 0.000000430864 |
| Cucumis melo | chr04 | 3 | CH_cme_204 | 2 | 2 | 0.000200133 |
| Corchorus olitorius | AWUE01022524.1 | 3 | CH_col_31 | 3 | 3 | 0.000000128001 |
| Durio zibethinus | NW_019167937.1 | 3 | CH_dzi_126 | 3 | 4 | 0.000000721738 |
| Punica granatum | NC_045129.1 | 3 | CH_pgr_303 | 3 | 13 | 0.000202484 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_79 | 4 | 4 | 0.000000000159714 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_183 | 3 | 5 | 0.000000430864 |
| Cucumis melo | chr04 | 4 | CH_cme_204 | 2 | 2 | 0.000200133 |
| Corchorus olitorius | AWUE01022524.1 | 4 | CH_col_31 | 3 | 3 | 0.000000128001 |
| Durio zibethinus | NW_019167937.1 | 4 | CH_dzi_126 | 3 | 4 | 0.000000721738 |
| Punica granatum | NC_045129.1 | 4 | CH_pgr_303 | 3 | 13 | 0.000202484 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_79 | 4 | 4 | 0.000000000159714 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |