Functional clusters
Information
- Type Gene Ontology
- Description toxin activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_3 | 3 | CH_aly_261 | 2 | 2 | 0.000198013 |
| Brassica carinata | ChrB01 | 3 | CH_bca_14 | 6 | 6 | 5.027e-19 |
| Brassica carinata | ChrB01 | 3 | CH_bca_452 | 3 | 8 | 0.0000174555 |
| Cannabis sativa | NC_044370.1 | 3 | CH_cansat_152 | 3 | 11 | 0.00000452559 |
| Cardamine hirsuta | Chr6 | 3 | CH_chi_214 | 3 | 11 | 0.0000661334 |
| Capsella rubella | scaffold_7 | 3 | CH_cru_6 | 9 | 10 | 5.42808e-23 |
| Capsella rubella | scaffold_3 | 3 | CH_cru_93 | 4 | 4 | 0.0000000205813 |
| Oryza sativa ssp. japonica | chr06 | 3 | CH_osa_50 | 6 | 15 | 0.00000000000465436 |
| Papaver somniferum | NW_020620714.1 | 3 | CH_pso_316 | 3 | 6 | 0.00000127886 |
| Salvia bowleyana | GWHASIU00000003 | 3 | CH_sbo_142 | 5 | 45 | 0.00000000492869 |
| Sechium edule | LG07 | 3 | CH_sed_225 | 3 | 42 | 0.000349736 |
| Arabidopsis lyrata | scaffold_3 | 4 | CH_aly_261 | 2 | 2 | 0.000198013 |
| Brassica carinata | ChrB01 | 4 | CH_bca_14 | 6 | 6 | 5.027e-19 |
| Brassica carinata | ChrB01 | 4 | CH_bca_452 | 3 | 8 | 0.0000174555 |
| Cannabis sativa | NC_044370.1 | 4 | CH_cansat_152 | 3 | 11 | 0.00000452559 |
| Cardamine hirsuta | Chr6 | 4 | CH_chi_214 | 3 | 11 | 0.0000661334 |
| Capsella rubella | scaffold_7 | 4 | CH_cru_6 | 9 | 10 | 5.42808e-23 |
| Capsella rubella | scaffold_3 | 4 | CH_cru_93 | 4 | 4 | 0.0000000205813 |
| Oryza sativa ssp. japonica | chr06 | 4 | CH_osa_50 | 6 | 15 | 0.00000000000465436 |
| Papaver somniferum | NW_020620714.1 | 4 | CH_pso_316 | 3 | 6 | 0.00000127886 |
| Salvia bowleyana | GWHASIU00000003 | 4 | CH_sbo_142 | 5 | 45 | 0.00000000492869 |
| Sechium edule | LG07 | 4 | CH_sed_225 | 3 | 42 | 0.000349736 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |