Functional clusters

Information

  • Type Gene Ontology
  • Description U2AF complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr6 3 CH_ccan_278 2 2 0.000153321
Capsella rubella scaffold_1 3 CH_cru_304 2 2 0.000438693
Durio zibethinus NW_019167982.1 3 CH_dzi_368 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_423 2 2 0.000448722
Gossypium raimondii Chr05 3 CH_gra_363 2 2 0.00080416
Lonicera japonica GWHAAZE00000005 3 CH_lonja_508 2 2 0.000359324
Magnolia biondii Chr04 3 CH_mbi_615 2 2 0.000485661
Olea europaea chr1 3 CH_oeu_364 2 2 0.000800683
Pisum sativum chr6LG2 3 CH_psa_362 2 2 0.000521635
Phaseolus vulgaris Chr05 3 CH_pvu_373 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_322 3 3 0.000000524459
Selaginella moellendorffii scaffold_24 3 CH_smo_197 2 2 0.000933707
Solanum pennellii Spenn-ch01 3 CH_spe_385 2 2 0.000266874
Theobroma cacao Chromosome_9 3 CH_tca_367 2 2 0.000439432
Tripterygium wilfordii NC_052236.1 3 CH_twi_333 2 2 0.00083682
Vaccinium macrocarpon scaffold00230_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_400 2 2 0.000929238
Vigna mungo CM024079.1 3 CH_vmu_310 2 2 0.000646141
Vanilla planifolia CM028154.1 3 CH_vpl_136 3 11 0.00000540224
Coffea canephora chr6 4 CH_ccan_278 2 2 0.000153321
Capsella rubella scaffold_1 4 CH_cru_304 2 2 0.000438693
Durio zibethinus NW_019167982.1 4 CH_dzi_368 2 2 0.000973326
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_423 2 2 0.000448722
Gossypium raimondii Chr05 4 CH_gra_363 2 2 0.00080416
Lonicera japonica GWHAAZE00000005 4 CH_lonja_508 2 2 0.000359324
Magnolia biondii Chr04 4 CH_mbi_615 2 2 0.000485661
Olea europaea chr1 4 CH_oeu_364 2 2 0.000800683
Pisum sativum chr6LG2 4 CH_psa_362 2 2 0.000521635
Phaseolus vulgaris Chr05 4 CH_pvu_373 2 2 0.000734727
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_322 3 3 0.000000524459
Selaginella moellendorffii scaffold_24 4 CH_smo_197 2 2 0.000933707
Solanum pennellii Spenn-ch01 4 CH_spe_385 2 2 0.000266874
Theobroma cacao Chromosome_9 4 CH_tca_367 2 2 0.000439432
Tripterygium wilfordii NC_052236.1 4 CH_twi_333 2 2 0.00083682
Vaccinium macrocarpon scaffold00230_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_400 2 2 0.000929238
Vigna mungo CM024079.1 4 CH_vmu_310 2 2 0.000646141
Vanilla planifolia CM028154.1 4 CH_vpl_136 3 11 0.00000540224

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001