Functional clusters
Information
- Type Gene Ontology
- Description 3-methylthiopropyl glucosinolate S-oxygenase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 3 | CH_aar_168 | 2 | 2 | 0.0000912326 |
| Aquilegia oxysepala | CHR07 | 3 | CH_aox_55 | 3 | 3 | 0.00000000964818 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 3 | CH_bvu_214 | 2 | 2 | 0.000248375 |
| Camellia sinensis var. sinensis | Chr6 | 3 | CH_camsi_605 | 2 | 2 | 0.000137564 |
| Corylus avellana | 4 | 3 | CH_cav_318 | 2 | 3 | 0.00023 |
| Citrus clementina | scaffold_3 | 3 | CH_ccl_318 | 2 | 2 | 0.0000820311 |
| Carpinus fangiana | Cfa05 | 3 | CH_cfa_298 | 2 | 4 | 0.000454373 |
| Cucumis melo | chr06 | 3 | CH_cme_39 | 4 | 6 | 0.0000000000133605 |
| Corchorus olitorius | AWUE01023859.1 | 3 | CH_col_33 | 3 | 3 | 0.000000128001 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2751 | 3 | CH_cqu_147 | 3 | 3 | 0.000000117869 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 3 | CH_eca_315 | 2 | 3 | 0.000134614 |
| Fragaria x ananassa | Fvb5-1 | 3 | CH_fan_117 | 3 | 3 | 0.0000000179753 |
| Fragaria vesca | Fvb5 | 3 | CH_fve_132 | 3 | 3 | 0.000000104115 |
| Manihot esculenta | Chromosome02 | 3 | CH_mes_274 | 2 | 2 | 0.0000610631 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_310 | 2 | 3 | 0.000225098 |
| Trochodendron aralioides | group1 | 3 | CH_tar_284 | 2 | 2 | 0.0000600366 |
| Tripterygium wilfordii | NC_052251.1 | 3 | CH_twi_235 | 2 | 3 | 0.000167359 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_84 | 3 | 3 | 0.0000000129529 |
| Vitis vinifera | chr2 | 3 | CH_vvi_83 | 4 | 4 | 0.0000000000462124 |
| Aethionema arabicum | LG-2 | 4 | CH_aar_168 | 2 | 2 | 0.0000912326 |
| Aquilegia oxysepala | CHR07 | 4 | CH_aox_55 | 3 | 3 | 0.00000000964818 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 4 | CH_bvu_214 | 2 | 2 | 0.000248375 |
| Camellia sinensis var. sinensis | Chr6 | 4 | CH_camsi_605 | 2 | 2 | 0.000137564 |
| Corylus avellana | 4 | 4 | CH_cav_318 | 2 | 3 | 0.00023 |
| Citrus clementina | scaffold_3 | 4 | CH_ccl_318 | 2 | 2 | 0.0000820311 |
| Carpinus fangiana | Cfa05 | 4 | CH_cfa_298 | 2 | 4 | 0.000454373 |
| Cucumis melo | chr06 | 4 | CH_cme_39 | 4 | 6 | 0.0000000000133605 |
| Corchorus olitorius | AWUE01023859.1 | 4 | CH_col_33 | 3 | 3 | 0.000000128001 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2751 | 4 | CH_cqu_147 | 3 | 3 | 0.000000117869 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 4 | CH_eca_315 | 2 | 3 | 0.000134614 |
| Fragaria x ananassa | Fvb5-1 | 4 | CH_fan_117 | 3 | 3 | 0.0000000179753 |
| Fragaria vesca | Fvb5 | 4 | CH_fve_132 | 3 | 3 | 0.000000104115 |
| Manihot esculenta | Chromosome02 | 4 | CH_mes_274 | 2 | 2 | 0.0000610631 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_310 | 2 | 3 | 0.000225098 |
| Trochodendron aralioides | group1 | 4 | CH_tar_284 | 2 | 2 | 0.0000600366 |
| Tripterygium wilfordii | NC_052251.1 | 4 | CH_twi_235 | 2 | 3 | 0.000167359 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_84 | 3 | 3 | 0.0000000129529 |
| Vitis vinifera | chr2 | 4 | CH_vvi_83 | 4 | 4 | 0.0000000000462124 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |