Functional clusters

Information

  • Type Gene Ontology
  • Description cellular response to calcium ion starvation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 3 CH_acertr_260 3 14 0.0000271099
Actinidia chinensis Lachesis_group9 3 CH_ach_179 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 3 CH_amhyb_63 3 6 0.000000850101
Brassica carinata ChrC02 3 CH_bca_254 3 4 0.000000230293
Brassica carinata ChrB02 3 CH_bca_953 2 2 0.000769551
Brassica napus A04 3 CH_bna_570 2 2 0.000389795
Corylus avellana 2 3 CH_cav_259 2 2 0.0000766695
Carpinus fangiana Cfa02 3 CH_cfa_84 3 3 0.00000000860393
Carya illinoinensis Chr07 3 CH_cil_343 2 2 0.0000619828
Citrullus lanatus CG_Chr09 3 CH_cla_111 2 2 0.0000887115
Cucumis melo chr01 3 CH_cme_182 2 2 0.0000667111
Cucumis sativus L. chr7 3 CH_csa_191 2 2 0.0000834759
Daucus carota DCARv2_Chr1 3 CH_dca_250 2 2 0.0000637775
Eutrema salsugineum scaffold_15 3 CH_esa_233 2 4 0.000456864
Fragaria x ananassa Fvb2-2 3 CH_fan_546 2 3 0.000832634
Fragaria vesca Fvb2 3 CH_fve_350 2 3 0.000530165
Gossypium hirsutum A07 3 CH_ghi_265 3 3 0.000000486611
Gossypium hirsutum D07 3 CH_ghi_293 3 4 0.00000194618
Glycine max Gm10 3 CH_gma_336 2 2 0.000113867
Gossypium raimondii Chr01 3 CH_gra_121 3 3 0.0000000862255
Gossypium raimondii Chr07 3 CH_gra_359 2 2 0.00080416
Helianthus annuus HanXRQChr01 3 CH_han_540 2 2 0.000115929
Hydrangea macrophylla Hma1.2p1_0212F.1 3 CH_hma_236 2 3 0.000333241
Lactuca sativa Lsat_1_v8_lg_5 3 CH_lsa_70 4 4 0.00000000000203719
Malus domestica Chr03 3 CH_mdo_494 2 2 0.000113763
Manihot esculenta Chromosome01 3 CH_mes_281 2 2 0.0000610631
Medicago truncatula chr1 3 CH_mtr_497 2 2 0.0000410863
Prunus persica Pp08 3 CH_ppe_331 2 2 0.0000745962
Pisum sativum chr6LG2 3 CH_psa_231 2 2 0.0000521635
Populus trichocarpa Chr14 3 CH_ptr_107 4 4 0.0000000000202774
Quercus lobata 12 3 CH_qlo_328 3 3 0.00000000399842
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_580 2 3 0.000119593
Salix brachista GWHAAZH00000014 3 CH_sbr_121 3 3 0.0000000595633
Simmondsia chinensis GWHAASQ00000024 3 CH_sci_110 3 19 0.0000105301
Theobroma cacao Chromosome_1 3 CH_tca_15 6 8 9.29478e-18
Trifolium pratense Tp57577_TGAC_v2_LG1 3 CH_tpr_58 3 3 0.00000000859546
Tripterygium wilfordii NC_052249.1 3 CH_twi_36 4 5 0.00000000000260458
Acer truncatum chr12 4 CH_acertr_260 3 14 0.0000271099
Actinidia chinensis Lachesis_group9 4 CH_ach_179 2 2 0.000162964
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 4 CH_amhyb_63 3 6 0.000000850101
Brassica carinata ChrC02 4 CH_bca_254 3 4 0.000000230293
Brassica carinata ChrB02 4 CH_bca_953 2 2 0.000769551
Brassica napus A04 4 CH_bna_570 2 2 0.000389795
Corylus avellana 2 4 CH_cav_259 2 2 0.0000766695
Carpinus fangiana Cfa02 4 CH_cfa_84 3 3 0.00000000860393
Carya illinoinensis Chr07 4 CH_cil_343 2 2 0.0000619828
Citrullus lanatus CG_Chr09 4 CH_cla_111 2 2 0.0000887115
Cucumis melo chr01 4 CH_cme_182 2 2 0.0000667111
Cucumis sativus L. chr7 4 CH_csa_191 2 2 0.0000834759
Daucus carota DCARv2_Chr1 4 CH_dca_250 2 2 0.0000637775
Eutrema salsugineum scaffold_15 4 CH_esa_233 2 4 0.000456864
Fragaria x ananassa Fvb2-2 4 CH_fan_546 2 3 0.000832634
Fragaria vesca Fvb2 4 CH_fve_350 2 3 0.000530165
Gossypium hirsutum A07 4 CH_ghi_265 3 3 0.000000486611
Gossypium hirsutum D07 4 CH_ghi_293 3 4 0.00000194618
Glycine max Gm10 4 CH_gma_336 2 2 0.000113867
Gossypium raimondii Chr01 4 CH_gra_121 3 3 0.0000000862255
Gossypium raimondii Chr07 4 CH_gra_359 2 2 0.00080416
Helianthus annuus HanXRQChr01 4 CH_han_540 2 2 0.000115929
Hydrangea macrophylla Hma1.2p1_0212F.1 4 CH_hma_236 2 3 0.000333241
Lactuca sativa Lsat_1_v8_lg_5 4 CH_lsa_70 4 4 0.00000000000203719
Malus domestica Chr03 4 CH_mdo_494 2 2 0.000113763
Manihot esculenta Chromosome01 4 CH_mes_281 2 2 0.0000610631
Medicago truncatula chr1 4 CH_mtr_497 2 2 0.0000410863
Prunus persica Pp08 4 CH_ppe_331 2 2 0.0000745962
Pisum sativum chr6LG2 4 CH_psa_231 2 2 0.0000521635
Populus trichocarpa Chr14 4 CH_ptr_107 4 4 0.0000000000202774
Quercus lobata 12 4 CH_qlo_328 3 3 0.00000000399842
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_580 2 3 0.000119593
Salix brachista GWHAAZH00000014 4 CH_sbr_121 3 3 0.0000000595633
Simmondsia chinensis GWHAASQ00000024 4 CH_sci_110 3 19 0.0000105301
Theobroma cacao Chromosome_1 4 CH_tca_15 6 8 9.29478e-18
Trifolium pratense Tp57577_TGAC_v2_LG1 4 CH_tpr_58 3 3 0.00000000859546
Tripterygium wilfordii NC_052249.1 4 CH_twi_36 4 5 0.00000000000260458

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001