Functional clusters

Information

  • Type Gene Ontology
  • Description ubiquitin-dependent protein catabolic process via the N-end rule pathway

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 3 CH_acertr_113 3 3 0.00000002982
Brassica carinata ChrC03 3 CH_bca_871 2 2 0.00059854
Corylus avellana 8 3 CH_cav_371 2 2 0.000460017
Ceratophyllum demersum 2 3 CH_cde_137 2 2 0.000236939
Carica papaya supercontig_228 3 CH_cpa_221 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_1846 3 CH_cqu_225 3 6 0.00000235671
Eucalyptus grandis Chr11 3 CH_egr_772 2 2 0.000175582
Oryza sativa ssp. japonica chr01 3 CH_osa_341 2 2 0.000158437
Petunia axillaris Peaxi162Scf00094 3 CH_pax_291 2 2 0.000422134
Simmondsia chinensis GWHAASQ00000020 3 CH_sci_78 3 6 0.000000869754
Sapria himalayana scaffold11_13529635 3 CH_shi_199 2 2 0.000171541
Utricularia gibba unitig_0 3 CH_ugi_94 2 2 0.000246144
Vitis vinifera chr8 3 CH_vvi_373 2 2 0.000456378
Acer truncatum chr8 4 CH_acertr_113 3 3 0.00000002982
Brassica carinata ChrC03 4 CH_bca_871 2 2 0.00059854
Corylus avellana 8 4 CH_cav_371 2 2 0.000460017
Ceratophyllum demersum 2 4 CH_cde_137 2 2 0.000236939
Carica papaya supercontig_228 4 CH_cpa_221 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_1846 4 CH_cqu_225 3 6 0.00000235671
Eucalyptus grandis Chr11 4 CH_egr_772 2 2 0.000175582
Oryza sativa ssp. japonica chr01 4 CH_osa_341 2 2 0.000158437
Petunia axillaris Peaxi162Scf00094 4 CH_pax_291 2 2 0.000422134
Simmondsia chinensis GWHAASQ00000020 4 CH_sci_78 3 6 0.000000869754
Sapria himalayana scaffold11_13529635 4 CH_shi_199 2 2 0.000171541
Utricularia gibba unitig_0 4 CH_ugi_94 2 2 0.000246144
Vitis vinifera chr8 4 CH_vvi_373 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001