Functional clusters
Information
- Type Gene Ontology
- Description cellular response to hypoxia
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr13 | 3 | CH_camsi_110 | 6 | 13 | 0.0000000000254241 |
| Camellia sinensis var. sinensis | Chr2 | 3 | CH_camsi_292 | 4 | 6 | 0.000000356417 |
| Corylus avellana | 3 | 3 | CH_cav_223 | 3 | 3 | 0.0000437356 |
| Carya illinoinensis | Chr05 | 3 | CH_cil_326 | 3 | 3 | 0.0000569383 |
| Daucus carota | DCARv2_Chr7 | 3 | CH_dca_204 | 4 | 12 | 0.000013772 |
| Durio zibethinus | NW_019167971.1 | 3 | CH_dzi_196 | 3 | 3 | 0.0000397677 |
| Erythranthe guttata | scaffold_2 | 3 | CH_egut_388 | 3 | 5 | 0.000475082 |
| Gossypium hirsutum | D12 | 3 | CH_ghi_232 | 4 | 6 | 0.00000016654 |
| Gossypium hirsutum | A12 | 3 | CH_ghi_372 | 3 | 3 | 0.0000184976 |
| Gossypium raimondii | Chr08 | 3 | CH_gra_72 | 5 | 6 | 0.0000000000881795 |
| Lotus japonicus | chr3 | 3 | CH_lja_252 | 3 | 4 | 0.000152055 |
| Magnolia biondii | Chr16 | 3 | CH_mbi_446 | 3 | 5 | 0.000103393 |
| Manihot esculenta | Chromosome17 | 3 | CH_mes_73 | 6 | 6 | 0.000000000000178979 |
| Medicago truncatula | chr4 | 3 | CH_mtr_457 | 3 | 3 | 0.000026993 |
| Punica granatum | NC_045130.1 | 3 | CH_pgr_11 | 8 | 8 | 2.06474e-19 |
| Physcomitrium patens | Chr02 | 3 | CH_ppa_222 | 4 | 26 | 0.000668988 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_225 | 4 | 5 | 0.000000331258 |
| Rhododendron simsii | chr03 | 3 | CH_rsi_337 | 3 | 3 | 0.0000570869 |
| Salix brachista | GWHAAZH00000014 | 3 | CH_sbr_29 | 9 | 42 | 0.0000000000000240569 |
| Selenicereus undatus | Scaffold_33676 | 3 | CH_sun_82 | 3 | 3 | 0.000025947 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_196 | 3 | CH_tpr_252 | 3 | 5 | 0.000152041 |
| Tripterygium wilfordii | NC_052242.1 | 3 | CH_twi_194 | 4 | 10 | 0.0000460709 |
| Vanilla planifolia | CM028150.1 | 3 | CH_vpl_243 | 3 | 4 | 0.000178571 |
| Vanilla planifolia | CM028159.1 | 3 | CH_vpl_85 | 4 | 5 | 0.000000247405 |
| Camellia sinensis var. sinensis | Chr13 | 4 | CH_camsi_110 | 6 | 13 | 0.0000000000254241 |
| Camellia sinensis var. sinensis | Chr2 | 4 | CH_camsi_292 | 4 | 6 | 0.000000356417 |
| Corylus avellana | 3 | 4 | CH_cav_223 | 3 | 3 | 0.0000437356 |
| Carya illinoinensis | Chr05 | 4 | CH_cil_326 | 3 | 3 | 0.0000569383 |
| Daucus carota | DCARv2_Chr7 | 4 | CH_dca_204 | 4 | 12 | 0.000013772 |
| Durio zibethinus | NW_019167971.1 | 4 | CH_dzi_196 | 3 | 3 | 0.0000397677 |
| Erythranthe guttata | scaffold_2 | 4 | CH_egut_388 | 3 | 5 | 0.000475082 |
| Gossypium hirsutum | D12 | 4 | CH_ghi_232 | 4 | 6 | 0.00000016654 |
| Gossypium hirsutum | A12 | 4 | CH_ghi_372 | 3 | 3 | 0.0000184976 |
| Gossypium raimondii | Chr08 | 4 | CH_gra_72 | 5 | 6 | 0.0000000000881795 |
| Lotus japonicus | chr3 | 4 | CH_lja_252 | 3 | 4 | 0.000152055 |
| Magnolia biondii | Chr16 | 4 | CH_mbi_446 | 3 | 5 | 0.000103393 |
| Manihot esculenta | Chromosome17 | 4 | CH_mes_73 | 6 | 6 | 0.000000000000178979 |
| Medicago truncatula | chr4 | 4 | CH_mtr_457 | 3 | 3 | 0.000026993 |
| Punica granatum | NC_045130.1 | 4 | CH_pgr_11 | 8 | 8 | 2.06474e-19 |
| Physcomitrium patens | Chr02 | 4 | CH_ppa_222 | 4 | 26 | 0.000668988 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_225 | 4 | 5 | 0.000000331258 |
| Rhododendron simsii | chr03 | 4 | CH_rsi_337 | 3 | 3 | 0.0000570869 |
| Salix brachista | GWHAAZH00000014 | 4 | CH_sbr_29 | 9 | 42 | 0.0000000000000240569 |
| Selenicereus undatus | Scaffold_33676 | 4 | CH_sun_82 | 3 | 3 | 0.000025947 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_196 | 4 | CH_tpr_252 | 3 | 5 | 0.000152041 |
| Tripterygium wilfordii | NC_052242.1 | 4 | CH_twi_194 | 4 | 10 | 0.0000460709 |
| Vanilla planifolia | CM028150.1 | 4 | CH_vpl_243 | 3 | 4 | 0.000178571 |
| Vanilla planifolia | CM028159.1 | 4 | CH_vpl_85 | 4 | 5 | 0.000000247405 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:1900039 | positive regulation of cellular response to hypoxia | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |