Functional clusters
Information
- Type Gene Ontology
- Description cellular response to molecule of bacterial origin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold1129 | 3 | CH_can_468 | 2 | 2 | 0.000826105 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_614 | 3 | 3 | 0.000000124594 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_335 | 3 | 9 | 0.0000185165 |
| Capsicum annuum | PGAv.1.6.scaffold1129 | 4 | CH_can_468 | 2 | 2 | 0.000826105 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_614 | 3 | 3 | 0.000000124594 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_335 | 3 | 9 | 0.0000185165 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0031663 | lipopolysaccharide-mediated signaling pathway | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |