Functional clusters

Information

  • Type Gene Ontology
  • Description BRCA1-A complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 3 CH_acertr_460 2 2 0.000422982
Arabidopsis lyrata scaffold_7 3 CH_aly_258 2 2 0.000198013
Coffea canephora chr10 3 CH_ccan_174 2 2 0.0000127767
Chenopodium quinoa C_Quinoa_Scaffold_4319 3 CH_cqu_172 3 3 0.000000282885
Capsella rubella scaffold_7 3 CH_cru_277 2 2 0.000219346
Daucus carota DCARv2_Chr1 3 CH_dca_351 2 2 0.000382665
Hydrangea macrophylla Hma1.2p1_0638F.1 3 CH_hma_268 2 2 0.000333259
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_643 2 2 0.000239192
Acer truncatum chr13 4 CH_acertr_460 2 2 0.000422982
Arabidopsis lyrata scaffold_7 4 CH_aly_258 2 2 0.000198013
Coffea canephora chr10 4 CH_ccan_174 2 2 0.0000127767
Chenopodium quinoa C_Quinoa_Scaffold_4319 4 CH_cqu_172 3 3 0.000000282885
Capsella rubella scaffold_7 4 CH_cru_277 2 2 0.000219346
Daucus carota DCARv2_Chr1 4 CH_dca_351 2 2 0.000382665
Hydrangea macrophylla Hma1.2p1_0638F.1 4 CH_hma_268 2 2 0.000333259
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_643 2 2 0.000239192

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001