Functional clusters

Information

  • Type Gene Ontology
  • Description 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Davidia involucrata GWHABJS00000008 3 CH_din_316 2 4 0.00030006
Lupinus albus Lalb_Chr16 3 CH_lal_244 2 2 0.0000524824
Nelumbo nucifera chr4 3 CH_nnu_194 2 3 0.0000481684
Oryza sativa ssp. japonica chr02 3 CH_osa_294 2 2 0.0000528123
Solanum lycopersicum SL4.0ch04 3 CH_sly_358 2 2 0.0000586941
Vanilla planifolia CM028159.1 3 CH_vpl_62 4 25 0.0000000152983
Zea mays 5 3 CH_zma_196 2 2 0.0000511313
Davidia involucrata GWHABJS00000008 4 CH_din_316 2 4 0.00030006
Lupinus albus Lalb_Chr16 4 CH_lal_244 2 2 0.0000524824
Nelumbo nucifera chr4 4 CH_nnu_194 2 3 0.0000481684
Oryza sativa ssp. japonica chr02 4 CH_osa_294 2 2 0.0000528123
Solanum lycopersicum SL4.0ch04 4 CH_sly_358 2 2 0.0000586941
Vanilla planifolia CM028159.1 4 CH_vpl_62 4 25 0.0000000152983
Zea mays 5 4 CH_zma_196 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001