Functional clusters

Information

  • Type Gene Ontology
  • Description D-serine biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 3 CH_acertr_482 2 3 0.000634436
Aquilegia oxysepala CHR01 3 CH_aox_174 2 2 0.0000801989
Beta vulgaris Chr6_EL10_PGA_scaffold0 3 CH_bvu_174 2 2 0.0000827917
Cicer arietinum L. Ca_LG7_v3 3 CH_car_106 2 2 0.0000778301
Chenopodium quinoa C_Quinoa_Scaffold_4446 3 CH_cqu_423 2 2 0.000284293
Durio zibethinus NW_019167960.1 3 CH_dzi_264 2 2 0.000278093
Eucalyptus grandis Chr09 3 CH_egr_55 7 7 3.16664e-24
Glycine max Gm05 3 CH_gma_279 2 2 0.0000379557
Helianthus annuus HanXRQChr15 3 CH_han_512 2 3 0.000115926
Lotus japonicus chr4 3 CH_lja_216 2 2 0.0000715077
Magnolia biondii Chr19 3 CH_mbi_402 2 2 0.0000485661
Malus domestica Chr15 3 CH_mdo_149 3 3 0.00000000862825
Medicago truncatula chr8 3 CH_mtr_540 2 3 0.000123256
Oryza sativa ssp. japonica chr11 3 CH_osa_430 2 2 0.000528123
Prunus persica Pp07 3 CH_ppe_311 2 2 0.0000745962
Pisum sativum chr4LG4 3 CH_psa_262 2 3 0.000156486
Phaseolus vulgaris Chr03 3 CH_pvu_230 2 2 0.0000734727
Simmondsia chinensis GWHAASQ00000003 3 CH_sci_145 2 2 0.0000851426
Selenicereus undatus Scaffold_33679 3 CH_sun_140 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_scaf_342 3 CH_tpr_264 2 3 0.000227083
Acer truncatum chr3 4 CH_acertr_482 2 3 0.000634436
Aquilegia oxysepala CHR01 4 CH_aox_174 2 2 0.0000801989
Beta vulgaris Chr6_EL10_PGA_scaffold0 4 CH_bvu_174 2 2 0.0000827917
Cicer arietinum L. Ca_LG7_v3 4 CH_car_106 2 2 0.0000778301
Chenopodium quinoa C_Quinoa_Scaffold_4446 4 CH_cqu_423 2 2 0.000284293
Durio zibethinus NW_019167960.1 4 CH_dzi_264 2 2 0.000278093
Eucalyptus grandis Chr09 4 CH_egr_55 7 7 3.16664e-24
Glycine max Gm05 4 CH_gma_279 2 2 0.0000379557
Helianthus annuus HanXRQChr15 4 CH_han_512 2 3 0.000115926
Lotus japonicus chr4 4 CH_lja_216 2 2 0.0000715077
Magnolia biondii Chr19 4 CH_mbi_402 2 2 0.0000485661
Malus domestica Chr15 4 CH_mdo_149 3 3 0.00000000862825
Medicago truncatula chr8 4 CH_mtr_540 2 3 0.000123256
Oryza sativa ssp. japonica chr11 4 CH_osa_430 2 2 0.000528123
Prunus persica Pp07 4 CH_ppe_311 2 2 0.0000745962
Pisum sativum chr4LG4 4 CH_psa_262 2 3 0.000156486
Phaseolus vulgaris Chr03 4 CH_pvu_230 2 2 0.0000734727
Simmondsia chinensis GWHAASQ00000003 4 CH_sci_145 2 2 0.0000851426
Selenicereus undatus Scaffold_33679 4 CH_sun_140 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_scaf_342 4 CH_tpr_264 2 3 0.000227083

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001