Functional clusters
Information
- Type Gene Ontology
- Description phagophore
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-3 | 3 | CH_aar_275 | 2 | 2 | 0.000912326 |
| Brassica carinata | ChrB07 | 3 | CH_bca_368 | 3 | 8 | 0.00000322334 |
| Brassica napus | A06 | 3 | CH_bna_192 | 4 | 20 | 0.000000168914 |
| Brassica rapa | A06 | 3 | CH_bra_61 | 4 | 10 | 0.0000000098635 |
| Camellia sinensis var. sinensis | Chr14 | 3 | CH_camsi_823 | 2 | 4 | 0.000825322 |
| Physcomitrium patens | Chr14 | 3 | CH_ppa_14 | 4 | 5 | 0.000000000724558 |
| Aethionema arabicum | LG-3 | 4 | CH_aar_275 | 2 | 2 | 0.000912326 |
| Brassica carinata | ChrB07 | 4 | CH_bca_368 | 3 | 8 | 0.00000322334 |
| Brassica napus | A06 | 4 | CH_bna_192 | 4 | 20 | 0.000000168914 |
| Brassica rapa | A06 | 4 | CH_bra_61 | 4 | 10 | 0.0000000098635 |
| Camellia sinensis var. sinensis | Chr14 | 4 | CH_camsi_823 | 2 | 4 | 0.000825322 |
| Physcomitrium patens | Chr14 | 4 | CH_ppa_14 | 4 | 5 | 0.000000000724558 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |