Functional clusters
Information
- Type Gene Ontology
- Description zinc ion homeostasis
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr12 | 3 | CH_acertr_167 | 3 | 4 | 0.000000596332 |
| Aquilegia oxysepala | CHR02 | 3 | CH_aox_118 | 3 | 6 | 0.00000385776 |
| Camellia sinensis var. sinensis | Chr6 | 3 | CH_camsi_313 | 3 | 5 | 0.000000630717 |
| Capsicum annuum | PGAv.1.6.scaffold134 | 3 | CH_can_415 | 2 | 2 | 0.000495663 |
| Daucus carota | DCARv2_Chr9 | 3 | CH_dca_45 | 5 | 9 | 0.0000000000201067 |
| Glycine max | Gm06 | 3 | CH_gma_197 | 3 | 3 | 0.000000786602 |
| Glycine max | Gm13 | 3 | CH_gma_70 | 4 | 4 | 0.000000000164214 |
| Helianthus annuus | HanXRQChr04 | 3 | CH_han_184 | 4 | 6 | 0.00000000259854 |
| Lupinus albus | Lalb_Chr19 | 3 | CH_lal_27 | 6 | 10 | 0.00000000000000173771 |
| Lotus japonicus | chr3 | 3 | CH_lja_187 | 3 | 6 | 0.000025293 |
| Lotus japonicus | chr3 | 3 | CH_lja_302 | 3 | 13 | 0.000361057 |
| Medicago truncatula | chr8 | 3 | CH_mtr_175 | 4 | 5 | 0.000000000343293 |
| Oryza sativa ssp. japonica | chr11 | 3 | CH_osa_115 | 4 | 9 | 0.0000000153011 |
| Petunia axillaris | Peaxi162Scf00220 | 3 | CH_pax_289 | 2 | 2 | 0.000422134 |
| Phaseolus vulgaris | Chr11 | 3 | CH_pvu_48 | 5 | 5 | 0.000000000000100996 |
| Salix brachista | GWHAAZH00000010 | 3 | CH_sbr_348 | 2 | 2 | 0.00063014 |
| Sechium edule | LG07 | 3 | CH_sed_265 | 2 | 2 | 0.000713419 |
| Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_159 | 3 | 3 | 0.000000103353 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_191 | 3 | 3 | 0.0000000393922 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 3 | CH_tpr_18 | 5 | 5 | 0.0000000000000620702 |
| Tripterygium wilfordii | NC_052252.1 | 3 | CH_twi_187 | 3 | 10 | 0.0000313438 |
| Vigna mungo | CM024076.1 | 3 | CH_vmu_59 | 4 | 12 | 0.00000001401 |
| Vitis vinifera | chr13 | 3 | CH_vvi_104 | 4 | 7 | 0.00000000161681 |
| Acer truncatum | chr12 | 4 | CH_acertr_167 | 3 | 4 | 0.000000596332 |
| Aquilegia oxysepala | CHR02 | 4 | CH_aox_118 | 3 | 6 | 0.00000385776 |
| Camellia sinensis var. sinensis | Chr6 | 4 | CH_camsi_313 | 3 | 5 | 0.000000630717 |
| Capsicum annuum | PGAv.1.6.scaffold134 | 4 | CH_can_415 | 2 | 2 | 0.000495663 |
| Daucus carota | DCARv2_Chr9 | 4 | CH_dca_45 | 5 | 9 | 0.0000000000201067 |
| Glycine max | Gm06 | 4 | CH_gma_197 | 3 | 3 | 0.000000786602 |
| Glycine max | Gm13 | 4 | CH_gma_70 | 4 | 4 | 0.000000000164214 |
| Helianthus annuus | HanXRQChr04 | 4 | CH_han_184 | 4 | 6 | 0.00000000259854 |
| Lupinus albus | Lalb_Chr19 | 4 | CH_lal_27 | 6 | 10 | 0.00000000000000173771 |
| Lotus japonicus | chr3 | 4 | CH_lja_187 | 3 | 6 | 0.000025293 |
| Lotus japonicus | chr3 | 4 | CH_lja_302 | 3 | 13 | 0.000361057 |
| Medicago truncatula | chr8 | 4 | CH_mtr_175 | 4 | 5 | 0.000000000343293 |
| Oryza sativa ssp. japonica | chr11 | 4 | CH_osa_115 | 4 | 9 | 0.0000000153011 |
| Petunia axillaris | Peaxi162Scf00220 | 4 | CH_pax_289 | 2 | 2 | 0.000422134 |
| Phaseolus vulgaris | Chr11 | 4 | CH_pvu_48 | 5 | 5 | 0.000000000000100996 |
| Salix brachista | GWHAAZH00000010 | 4 | CH_sbr_348 | 2 | 2 | 0.00063014 |
| Sechium edule | LG07 | 4 | CH_sed_265 | 2 | 2 | 0.000713419 |
| Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_159 | 3 | 3 | 0.000000103353 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_191 | 3 | 3 | 0.0000000393922 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 4 | CH_tpr_18 | 5 | 5 | 0.0000000000000620702 |
| Tripterygium wilfordii | NC_052252.1 | 4 | CH_twi_187 | 3 | 10 | 0.0000313438 |
| Vigna mungo | CM024076.1 | 4 | CH_vmu_59 | 4 | 12 | 0.00000001401 |
| Vitis vinifera | chr13 | 4 | CH_vvi_104 | 4 | 7 | 0.00000000161681 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0032119 | sequestering of zinc ion | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |