Functional clusters
Information
- Type Gene Ontology
- Description phosphocholine phosphatase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00036 | 3 | CH_atr_196 | 2 | 2 | 0.0000794407 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 3 | CH_bvu_66 | 3 | 3 | 0.0000000102821 |
| Capsicum annuum | PGAv.1.6.scaffold900 | 3 | CH_can_113 | 4 | 5 | 0.00000000279027 |
| Capsicum annuum | PGAv.1.6.scaffold1389 | 3 | CH_can_194 | 3 | 3 | 0.00000168913 |
| Capsicum annuum | PGAv.1.6.scaffold635 | 3 | CH_can_195 | 3 | 3 | 0.00000168913 |
| Corylus avellana | 11 | 3 | CH_cav_248 | 2 | 2 | 0.0000766695 |
| Citrullus lanatus | CG_Chr09 | 3 | CH_cla_125 | 2 | 3 | 0.000266123 |
| Daucus carota | DCARv2_Chr7 | 3 | CH_dca_294 | 2 | 2 | 0.000191333 |
| Durio zibethinus | NW_019168037.1 | 3 | CH_dzi_116 | 3 | 10 | 0.000000386625 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_674 | 2 | 3 | 0.0000585274 |
| Glycine max | Gm07 | 3 | CH_gma_426 | 2 | 2 | 0.000379557 |
| Glycine max | Gm08 | 3 | CH_gma_427 | 2 | 2 | 0.000379557 |
| Lotus japonicus | chr3 | 3 | CH_lja_84 | 3 | 3 | 0.0000000306812 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 3 | CH_lsa_164 | 3 | 5 | 0.0000000396294 |
| Medicago truncatula | chr8 | 3 | CH_mtr_151 | 4 | 6 | 0.000000000046814 |
| Papaver somniferum | NC_039367.1 | 3 | CH_pso_218 | 3 | 3 | 0.0000000266479 |
| Papaver somniferum | NC_039364.1 | 3 | CH_pso_94 | 4 | 4 | 0.00000000000120075 |
| Phaseolus vulgaris | Chr10 | 3 | CH_pvu_56 | 4 | 4 | 0.00000000000595 |
| Solanum lycopersicum | SL4.0ch06 | 3 | CH_sly_156 | 3 | 3 | 0.0000000516764 |
| Solanum lycopersicum | SL4.0ch03 | 3 | CH_sly_535 | 2 | 2 | 0.000586941 |
| Solanum pennellii | Spenn-ch03 | 3 | CH_spe_414 | 2 | 2 | 0.00044479 |
| Selenicereus undatus | Scaffold_33676 | 3 | CH_sun_146 | 2 | 2 | 0.000217992 |
| Trochodendron aralioides | group3 | 3 | CH_tar_392 | 2 | 2 | 0.00036022 |
| Tarenaya hassleriana | NW_010968263.1 | 3 | CH_tha_5 | 5 | 5 | 0.00000000000000107126 |
| Tripterygium wilfordii | NC_052238.1 | 3 | CH_twi_206 | 2 | 2 | 0.000055788 |
| Amborella trichopoda | AmTr_v1.0_scaffold00036 | 4 | CH_atr_196 | 2 | 2 | 0.0000794407 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 4 | CH_bvu_66 | 3 | 3 | 0.0000000102821 |
| Capsicum annuum | PGAv.1.6.scaffold900 | 4 | CH_can_113 | 4 | 5 | 0.00000000279027 |
| Capsicum annuum | PGAv.1.6.scaffold1389 | 4 | CH_can_194 | 3 | 3 | 0.00000168913 |
| Capsicum annuum | PGAv.1.6.scaffold635 | 4 | CH_can_195 | 3 | 3 | 0.00000168913 |
| Corylus avellana | 11 | 4 | CH_cav_248 | 2 | 2 | 0.0000766695 |
| Citrullus lanatus | CG_Chr09 | 4 | CH_cla_125 | 2 | 3 | 0.000266123 |
| Daucus carota | DCARv2_Chr7 | 4 | CH_dca_294 | 2 | 2 | 0.000191333 |
| Durio zibethinus | NW_019168037.1 | 4 | CH_dzi_116 | 3 | 10 | 0.000000386625 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_674 | 2 | 3 | 0.0000585274 |
| Glycine max | Gm07 | 4 | CH_gma_426 | 2 | 2 | 0.000379557 |
| Glycine max | Gm08 | 4 | CH_gma_427 | 2 | 2 | 0.000379557 |
| Lotus japonicus | chr3 | 4 | CH_lja_84 | 3 | 3 | 0.0000000306812 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 4 | CH_lsa_164 | 3 | 5 | 0.0000000396294 |
| Medicago truncatula | chr8 | 4 | CH_mtr_151 | 4 | 6 | 0.000000000046814 |
| Papaver somniferum | NC_039367.1 | 4 | CH_pso_218 | 3 | 3 | 0.0000000266479 |
| Papaver somniferum | NC_039364.1 | 4 | CH_pso_94 | 4 | 4 | 0.00000000000120075 |
| Phaseolus vulgaris | Chr10 | 4 | CH_pvu_56 | 4 | 4 | 0.00000000000595 |
| Solanum lycopersicum | SL4.0ch06 | 4 | CH_sly_156 | 3 | 3 | 0.0000000516764 |
| Solanum lycopersicum | SL4.0ch03 | 4 | CH_sly_535 | 2 | 2 | 0.000586941 |
| Solanum pennellii | Spenn-ch03 | 4 | CH_spe_414 | 2 | 2 | 0.00044479 |
| Selenicereus undatus | Scaffold_33676 | 4 | CH_sun_146 | 2 | 2 | 0.000217992 |
| Trochodendron aralioides | group3 | 4 | CH_tar_392 | 2 | 2 | 0.00036022 |
| Tarenaya hassleriana | NW_010968263.1 | 4 | CH_tha_5 | 5 | 5 | 0.00000000000000107126 |
| Tripterygium wilfordii | NC_052238.1 | 4 | CH_twi_206 | 2 | 2 | 0.000055788 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |